Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0177 Cannabis sativa HOM05D017246 ORTHO05D022149 0.0e+00 1412.1 739 100.0
CANSAT11G1723 Cannabis sativa HOM05D017246 ORTHO05D022149 1.2e-26 125.9 184 36.4
CANSAT80G0769 Cannabis sativa HOM05D017246 ORTHO05D022149 4.7e-26 124.0 184 34.2
CANSAT80G0158 Cannabis sativa HOM05D000539 ORTHO05D000233 1.0e-20 106.3 72 61.1
CANSAT80G0086 Cannabis sativa HOM05D007909 ORTHO05D000743 2.6e-16 91.7 91 47.3
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 3.4e-16 91.3 92 47.8
CANSAT80G0598 Cannabis sativa HOM05D007909 ORTHO05D000743 8.4e-15 86.7 67 58.2
CANSAT56G1494 Cannabis sativa HOM05D024820 ORTHO05D022149 1.6e-13 82.4 212 28.8
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 3.5e-13 81.3 184 28.3
DCAR_015982 Daucus carota HOM05D016219 ORTHO05D020540 4.6e-13 80.9 104 36.5
DCAR_005686 Daucus carota HOM05D016219 ORTHO05D020540 1.0e-12 79.7 164 28.7
CANSAT25G0598 Cannabis sativa HOM05D017246 ORTHO05D001543 1.1e-11 76.3 170 29.4
CANSAT78G0828 Cannabis sativa HOM05D014347 ORTHO05D016861 2.1e-10 72.0 168 27.4
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 3.6e-10 71.2 273 27.1
CANSAT25G0068 Cannabis sativa HOM05D014347 ORTHO05D016861 6.2e-10 70.5 168 27.4
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 6.9e-09 67.0 188 28.7
MBI16_g34672_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 9.0e-09 66.6 151 29.1
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 1.3e-07 62.8 153 29.4
Oeu016274.1 Olea europaea HOM05D000784 ORTHO05D000276 3.8e-07 61.2 206 25.2
CANSAT64G0037 Cannabis sativa HOM05D014149 ORTHO05D011451 4.9e-07 60.8 156 31.4
Oeu019335.1 Olea europaea HOM05D002774 ORTHO05D000116 4.9e-07 60.8 177 24.9
Oeu014996.1 Olea europaea HOM05D000396 ORTHO05D000116 6.4e-07 60.5 146 27.4
Carub.0007s2351 Capsella rubella HOM05D001093 ORTHO05D011195 8.4e-07 60.1 104 30.8
FvH4_4g13550 Fragaria vesca HOM05D008195 ORTHO05D010605 8.4e-07 60.1 89 34.8
RcHm_v2.0_Chr1g0325301 Rosa chinensis HOM05D041769 ORTHO05D000116 1.1e-06 59.7 228 22.4
FvH4_5g13930 Fragaria vesca HOM05D007909 ORTHO05D000743 1.9e-06 58.9 96 32.3
FAN17G0179 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.4e-06 58.5 76 36.8
Oeu052744.1 Olea europaea HOM05D002774 ORTHO05D000116 2.4e-06 58.5 160 26.2
Oeu058073.1 Olea europaea HOM05D002774 ORTHO05D000116 2.4e-06 58.5 147 27.9
Oeu049204.1 Olea europaea HOM05D002774 ORTHO05D000116 3.2e-06 58.2 106 31.1
Zm00001eb375230 Zea mays HOM05D004287 ORTHO05D000116 3.2e-06 58.2 122 30.3
Aqoxy3G03628 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 4.2e-06 57.8 64 39.1
Oeu044031.1 Olea europaea HOM05D000396 ORTHO05D000116 5.5e-06 57.4 146 28.8
Os02g0307900 Oryza sativa ssp. japonica HOM05D000396 ORTHO05D000116 5.5e-06 57.4 107 32.7
RcHm_v2.0_Chr7g0183021 Rosa chinensis HOM05D007909 ORTHO05D000743 5.5e-06 57.4 58 44.8
Oeu034663.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-06 57.0 152 27.0
Oeu030706.1 Olea europaea HOM05D002774 ORTHO05D000116 9.3e-06 56.6 102 30.4
HPP92_011027 Vanilla planifolia HOM05D009441 ORTHO05D010605 9.3e-06 56.6 57 47.4


User provided reference genes

Program Settings