Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 4.3e-115 417.9 201 100.0
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 6.1e-53 211.5 209 60.3
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 3.1e-52 209.1 205 60.5
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 1.5e-51 206.8 200 61.5
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 3.4e-51 205.7 204 60.3
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 4.4e-51 205.3 183 66.1
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 9.8e-51 204.1 191 60.7
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 2.9e-50 202.6 162 66.7
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.1e-49 200.7 147 70.1
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 2.4e-49 199.5 159 70.4
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.4e-49 199.5 159 70.4
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 9.2e-49 197.6 188 60.6
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.0e-48 196.4 206 55.3
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.5e-48 195.7 150 72.0
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 4.6e-48 195.3 206 56.8
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.0e-47 194.1 213 56.8
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 2.3e-47 193.0 187 58.8
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.5e-46 190.3 200 55.0
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 3.3e-46 189.1 162 66.0
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 7.3e-46 188.0 183 57.4
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 7.3e-46 188.0 188 58.5
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 7.3e-46 188.0 202 56.9
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 9.5e-46 187.6 192 56.2
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.6e-45 186.8 202 56.4
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 3.6e-45 185.7 159 66.0
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.1e-44 184.1 201 58.7
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 3.4e-43 179.1 198 55.1
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 5.8e-43 178.3 108 82.4
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 9.8e-43 177.6 183 57.4
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 1.3e-42 177.2 147 63.9
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 2.2e-42 176.4 127 72.4
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.9e-42 175.3 127 70.9
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.9e-42 175.3 96 87.5
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 3.2e-41 172.6 139 63.3
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 4.1e-41 172.2 108 76.9
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.4e-41 171.8 163 56.4
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 7.0e-41 171.4 143 66.4
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 9.2e-41 171.0 146 63.0
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.2e-40 170.6 146 65.8
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.2e-40 170.6 125 72.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 2.1e-40 169.9 113 79.6
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 2.1e-40 169.9 192 55.2
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 2.1e-40 169.9 141 68.1
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 4.6e-40 168.7 101 82.2
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 7.8e-40 167.9 90 87.8
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 7.8e-40 167.9 112 75.9
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.0e-39 167.5 163 55.8
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.7e-39 166.8 102 80.4
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 6.6e-39 164.9 149 59.7
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.5e-38 163.7 108 73.1
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 1.9e-38 163.3 108 76.9
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 2.5e-38 162.9 155 57.4
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 7.3e-38 161.4 113 73.5
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 7.3e-38 161.4 102 75.5
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 7.3e-38 161.4 102 75.5
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 9.5e-38 161.0 169 54.4
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 9.5e-38 161.0 139 63.3
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 9.5e-38 161.0 121 67.8
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.6e-37 160.2 109 74.3
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 2.1e-37 159.8 111 72.1
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 2.8e-37 159.5 150 60.7
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 2.8e-37 159.5 112 69.6
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 3.6e-37 159.1 111 70.3
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 3.6e-37 159.1 111 68.5
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 4.7e-37 158.7 111 68.5
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 4.7e-37 158.7 111 68.5
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 8.1e-37 157.9 154 59.1
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 8.1e-37 157.9 120 66.7
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 3.1e-36 156.0 111 69.4
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 4.0e-36 155.6 135 65.2
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 4.0e-36 155.6 118 67.8
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 5.2e-36 155.2 110 68.2
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 6.8e-36 154.8 89 80.9
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.2e-35 154.1 91 79.1
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.5e-35 153.7 89 80.9
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 2.0e-35 153.3 112 66.1
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.6e-35 152.9 93 78.5
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 2.6e-35 152.9 114 68.4
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.4e-35 152.5 158 60.8
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 3.4e-35 152.5 129 64.3
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 4.4e-35 152.1 109 67.9
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 8.3e-34 147.9 136 58.1
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.4e-33 146.4 120 64.2
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.1e-33 145.6 89 74.2
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 9.2e-33 144.4 94 76.6
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.7e-32 142.9 87 77.0
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 3.5e-32 142.5 101 69.3
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 4.6e-32 142.1 89 73.0
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 1.0e-31 141.0 106 64.2
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 5.1e-31 138.7 101 66.3
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 3.6e-29 132.5 89 68.5
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 4.7e-29 132.1 140 52.9
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 6.2e-29 131.7 135 57.0
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.1e-28 131.0 95 66.3
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-28 130.2 90 73.3
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 1.8e-28 130.2 90 73.3
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 8.9e-28 127.9 110 60.0
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 2.0e-27 126.7 100 67.0
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 4.4e-27 125.6 100 60.0
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 4.4e-27 125.6 128 57.0
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 7.6e-27 124.8 100 60.0
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 5.4e-25 118.6 93 62.4
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.6e-24 117.1 92 56.5
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.6e-24 117.1 123 53.7
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 6.0e-24 115.2 111 55.9
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.3e-23 114.0 85 62.4
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.0e-23 112.8 100 56.0
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 7.3e-22 108.2 87 58.6
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.2e-21 107.5 109 48.6
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.6e-21 107.1 116 53.4
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 5.8e-19 98.6 117 52.1
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.4e-17 94.0 91 47.3
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.2e-17 92.4 90 63.3
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 4.2e-17 92.4 90 63.3
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.4e-12 77.4 154 37.7
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.6e-11 73.2 84 42.9
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.1e-09 67.8 40 75.0
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 4.2e-09 65.9 50 66.0


User provided reference genes

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