Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 1.4e-45 186.8 170 100.0
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 1.8e-29 133.3 82 73.2
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 6.8e-29 131.3 79 72.2
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 2.6e-28 129.4 79 69.6
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 3.4e-28 129.0 78 70.5
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 5.8e-28 128.3 78 70.5
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 7.6e-28 127.9 75 73.3
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 7.6e-28 127.9 82 69.5
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 7.6e-28 127.9 82 69.5
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 7.6e-28 127.9 74 74.3
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 9.9e-28 127.5 75 70.7
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 9.9e-28 127.5 81 70.4
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 1.3e-27 127.1 74 71.6
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 2.2e-27 126.3 82 68.3
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 2.2e-27 126.3 81 69.1
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 2.9e-27 125.9 79 67.1
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 2.9e-27 125.9 81 67.9
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 2.9e-27 125.9 78 69.2
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 3.8e-27 125.6 74 73.0
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 4.9e-27 125.2 73 72.6
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 4.9e-27 125.2 84 65.5
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 4.9e-27 125.2 78 70.5
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 6.4e-27 124.8 74 71.6
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 6.4e-27 124.8 81 69.1
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 6.4e-27 124.8 84 65.5
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 1.1e-26 124.0 84 65.5
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 1.1e-26 124.0 81 66.7
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 1.1e-26 124.0 78 67.9
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 1.4e-26 123.6 73 74.0
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 1.9e-26 123.2 76 68.4
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 4.1e-26 122.1 73 74.0
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.1e-26 122.1 79 67.1
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 4.1e-26 122.1 79 67.1
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 4.1e-26 122.1 74 70.3
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 4.1e-26 122.1 78 66.7
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 4.1e-26 122.1 82 65.9
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 5.4e-26 121.7 74 68.9
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.2e-26 120.9 78 67.9
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 9.2e-26 120.9 76 69.7
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 1.2e-25 120.6 78 64.1
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 1.6e-25 120.2 73 69.9
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 1.6e-25 120.2 75 70.7
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 2.1e-25 119.8 79 64.6
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 2.1e-25 119.8 78 61.5
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 2.1e-25 119.8 74 70.3
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 2.1e-25 119.8 74 68.9
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 3.5e-25 119.0 74 68.9
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 6.0e-25 118.2 71 69.0
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 7.8e-25 117.9 82 65.9
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 7.8e-25 117.9 81 65.4
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 7.8e-25 117.9 71 70.4
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.0e-24 117.5 74 64.9
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.0e-24 117.5 81 63.0
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 1.0e-24 117.5 77 67.5
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 1.0e-24 117.5 79 64.6
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 1.3e-24 117.1 77 63.6
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.3e-24 117.1 79 64.6
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 1.7e-24 116.7 71 69.0
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 1.7e-24 116.7 71 69.0
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 1.7e-24 116.7 71 69.0
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 1.7e-24 116.7 71 69.0
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 1.7e-24 116.7 71 69.0
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 3.0e-24 115.9 71 67.6
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 3.9e-24 115.5 82 62.2
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 3.9e-24 115.5 74 64.9
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 6.6e-24 114.8 71 67.6
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 8.6e-24 114.4 72 66.7
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 8.6e-24 114.4 75 62.7
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 1.5e-23 113.6 72 65.3
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 1.5e-23 113.6 79 58.2
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 2.5e-23 112.8 78 62.8
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 2.5e-23 112.8 80 60.0
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 2.5e-23 112.8 72 65.3
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 3.3e-23 112.5 74 62.2
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 3.3e-23 112.5 76 63.2
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 4.3e-23 112.1 73 65.8
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 5.6e-23 111.7 83 60.2
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 1.2e-22 110.5 74 60.8
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 1.6e-22 110.2 71 64.8
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 1.6e-22 110.2 73 61.6
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 2.1e-22 109.8 78 59.0
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 2.8e-22 109.4 71 64.8
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 4.7e-22 108.6 71 64.8
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 4.7e-22 108.6 72 61.1
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 1.5e-20 103.6 66 66.7
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 7.1e-18 94.7 65 60.0
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 1.7e-16 90.1 74 52.7
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 2.3e-16 89.7 53 75.5
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 5.1e-16 88.6 71 52.1
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 5.6e-15 85.1 59 59.3
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 2.1e-14 83.2 70 48.6
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 1.7e-11 73.6 80 43.8
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 2.9e-11 72.8 66 47.0
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 1.4e-10 70.5 77 39.0
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 8.7e-08 61.2 45 64.4


User provided reference genes

Program Settings