Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 2.3e-108 395.6 202 100.0
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 5.6e-22 108.6 109 52.3
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 2.8e-21 106.3 109 48.6
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 1.4e-20 104.0 108 50.0
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.8e-20 103.6 90 52.2
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 3.1e-20 102.8 109 46.8
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 1.5e-19 100.5 108 50.0
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 2.6e-19 99.8 129 48.1
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 3.4e-19 99.4 108 48.1
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 5.8e-19 98.6 141 44.7
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.0e-18 97.8 109 48.6
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.3e-18 97.4 141 44.7
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 1.3e-18 97.4 143 43.4
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 1.7e-18 97.1 108 48.1
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 2.2e-18 96.7 84 52.4
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 2.9e-18 96.3 108 46.3
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 4.9e-18 95.5 109 47.7
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 6.5e-18 95.1 131 43.5
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 8.4e-18 94.7 107 47.7
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 1.1e-17 94.4 92 54.3
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.1e-17 94.4 92 54.3
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.4e-17 94.0 129 46.5
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 1.4e-17 94.0 129 46.5
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 2.5e-17 93.2 105 49.5
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 3.2e-17 92.8 97 46.4
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.2e-17 92.4 126 44.4
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 4.2e-17 92.4 143 43.4
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 4.2e-17 92.4 89 51.7
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 9.3e-17 91.3 161 36.6
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 9.3e-17 91.3 161 36.6
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.2e-16 90.9 92 53.3
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 1.6e-16 90.5 109 51.4
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.1e-16 90.1 108 46.3
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 2.7e-16 89.7 130 40.8
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.5e-16 89.4 131 40.5
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 3.5e-16 89.4 108 47.2
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 7.9e-16 88.2 129 43.4
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 7.9e-16 88.2 109 46.8
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 1.0e-15 87.8 109 47.7
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 1.3e-15 87.4 87 50.6
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.8e-15 87.0 108 42.6
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 1.8e-15 87.0 134 39.6
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.3e-15 86.7 110 42.7
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.3e-15 86.7 109 45.9
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 5.1e-15 85.5 85 49.4
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 8.7e-15 84.7 105 43.8
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 1.1e-14 84.3 106 47.2
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-14 84.0 104 43.3
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 1.9e-14 83.6 90 46.7
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 2.5e-14 83.2 90 48.9
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 2.5e-14 83.2 130 38.5
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 2.5e-14 83.2 108 43.5
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 2.5e-14 83.2 104 42.3
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 3.3e-14 82.8 109 45.9
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 3.3e-14 82.8 129 42.6
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.3e-14 82.8 107 42.1
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 4.3e-14 82.4 99 47.5
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 4.3e-14 82.4 104 39.4
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 5.7e-14 82.0 90 46.7
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 5.7e-14 82.0 104 38.5
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 5.7e-14 82.0 119 44.5
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 7.4e-14 81.6 107 42.1
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 9.6e-14 81.3 129 38.0
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.3e-13 80.9 109 46.8
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 1.3e-13 80.9 90 46.7
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 1.3e-13 80.9 80 46.2
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 1.6e-13 80.5 90 47.8
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 2.1e-13 80.1 104 39.4
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 2.1e-13 80.1 95 40.0
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 2.8e-13 79.7 121 41.3
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.8e-13 79.7 107 43.0
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.8e-13 79.0 136 37.5
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 4.8e-13 79.0 128 39.1
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 4.8e-13 79.0 97 44.3
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.1e-12 77.8 107 42.1
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.1e-12 77.8 90 45.6
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 1.4e-12 77.4 84 48.8
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 1.4e-12 77.4 136 36.8
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 1.4e-12 77.4 123 39.0
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.8e-12 77.0 80 50.0
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 2.4e-12 76.6 111 45.0
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 2.4e-12 76.6 111 38.7
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 2.4e-12 76.6 108 41.7
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 3.1e-12 76.3 108 42.6
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 4.1e-12 75.9 115 42.6
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 4.1e-12 75.9 106 44.3
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 9.0e-12 74.7 92 43.5
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 2.6e-11 73.2 80 46.2
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.6e-11 73.2 107 40.2
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 2.6e-11 73.2 111 40.5
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 5.8e-11 72.0 75 48.0
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 5.8e-11 72.0 99 40.4
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 5.8e-11 72.0 82 43.9
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 1.0e-10 71.2 78 43.6
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 1.0e-10 71.2 78 46.2
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 1.0e-10 71.2 77 44.2
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 2.2e-10 70.1 147 36.1
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 2.9e-10 69.7 79 46.8
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 2.9e-10 69.7 93 43.0
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 2.9e-10 69.7 93 43.0
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 3.8e-10 69.3 98 38.8
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 3.8e-10 69.3 111 39.6
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 3.8e-10 69.3 91 41.8
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 3.8e-10 69.3 91 41.8
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.0e-10 68.9 93 43.0
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.0e-10 68.9 93 43.0
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 6.5e-10 68.6 82 46.3
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 8.4e-10 68.2 109 40.4
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 1.1e-09 67.8 133 34.6
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.1e-09 67.8 120 37.5
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 1.4e-09 67.4 67 47.8
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 1.4e-09 67.4 111 41.4
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 1.4e-09 67.4 108 38.0
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.9e-09 67.0 128 37.5
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 2.5e-09 66.6 85 45.9
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 2.5e-09 66.6 92 37.0
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.2e-09 66.2 97 40.2
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 5.5e-09 65.5 94 39.4
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 7.1e-09 65.1 101 39.6
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 7.1e-09 65.1 108 32.4
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 1.6e-08 63.9 106 38.7
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 1.6e-08 63.9 92 37.0
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.1e-08 63.5 80 40.0
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 3.5e-08 62.8 88 40.9
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 4.6e-08 62.4 126 34.9
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 4.6e-08 62.4 91 39.6
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 7.9e-08 61.6 85 41.2
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 3.0e-07 59.7 106 36.8
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 8.7e-07 58.2 111 35.1
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 7.4e-06 55.1 90 33.3


User provided reference genes

Program Settings