Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2514 Cannabis sativa HOM05D007305 ORTHO05D009886 6.1e-118 427.6 226 100.0
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 6.5e-51 204.9 223 54.3
Manes.15G058801 Manihot esculenta HOM05D007305 ORTHO05D009886 8.7e-48 194.5 222 53.2
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 5.7e-47 191.8 222 51.8
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 5.7e-47 191.8 222 51.8
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 4.8e-46 188.7 225 50.7
Manes.01G039012 Manihot esculenta HOM05D007305 ORTHO05D009886 2.4e-45 186.4 199 56.3
Manes.15G168650 Manihot esculenta HOM05D007305 ORTHO05D009886 5.9e-44 181.8 193 56.0
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.4e-37 160.6 186 52.2
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 3.1e-37 159.5 185 50.8
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 3.1e-37 159.5 186 52.2
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-35 151.8 226 44.7
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 3.2e-34 149.4 187 50.3
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 9.1e-29 131.3 155 51.6
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 4.5e-28 129.0 232 40.9
Manes.13G079525 Manihot esculenta HOM05D007305 ORTHO05D009886 1.0e-27 127.9 143 52.4
Manes.08G072166 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-22 110.9 146 50.0
SHI21600 Sapria himalayana HOM05D000002 ORTHO05D009886 1.7e-22 110.5 177 41.2
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 8.2e-22 108.2 203 38.9
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 5.3e-21 105.5 192 41.7
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 3.5e-20 102.8 91 62.6
Manes.06G147450 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-19 100.9 128 51.6
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-19 100.9 218 35.3
Manes.18G035550 Manihot esculenta HOM05D007305 ORTHO05D009886 2.9e-19 99.8 139 48.9
Cpa.g.sc37.32 Carica papaya HOM05D007305 ORTHO05D009886 8.5e-19 98.2 179 38.0
SHI14644 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-18 95.9 188 35.6
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 7.2e-18 95.1 89 59.6
SHI21345 Sapria himalayana HOM05D000002 ORTHO05D009886 8.0e-17 91.7 213 31.5
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 8.0e-17 91.7 145 42.1
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 1.4e-16 90.9 242 31.0
SHI17479 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-16 90.1 185 35.7
SHI25004 Sapria himalayana HOM05D007305 ORTHO05D009886 4.0e-16 89.4 217 34.1
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 6.8e-16 88.6 237 30.8
SHI20378 Sapria himalayana HOM05D000002 ORTHO05D009886 8.8e-16 88.2 199 33.2
TWI73G0357 Tripterygium wilfordii HOM05D023524 ORTHO05D009886 8.8e-16 88.2 240 33.3
Manes.18G104116 Manihot esculenta HOM05D007305 ORTHO05D009886 2.6e-15 86.7 107 50.5
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 5.7e-15 85.5 237 30.4
Manes.13G105340 Manihot esculenta HOM05D007305 ORTHO05D009886 7.5e-15 85.1 152 40.1
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 2.2e-14 83.6 61 68.9
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-14 83.2 181 37.0
SHI24240 Sapria himalayana HOM05D007305 ORTHO05D009886 2.8e-14 83.2 88 53.4
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 4.8e-14 82.4 173 38.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-14 81.6 221 32.6
SHI22311 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-14 81.6 216 33.3
SHI26075 Sapria himalayana HOM05D007305 ORTHO05D009886 1.4e-13 80.9 61 63.9
SHI21519 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-13 80.5 216 31.9
SHI11377 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-13 79.7 216 31.9
Manes.02G001425 Manihot esculenta HOM05D000002 ORTHO05D000001 4.1e-13 79.3 63 65.1
SHI11086 Sapria himalayana HOM05D007305 ORTHO05D009886 4.1e-13 79.3 181 39.2
SHI25917 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-13 79.0 216 31.9
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-13 78.2 216 31.5
SHI00069 Sapria himalayana HOM05D000002 ORTHO05D009886 1.6e-12 77.4 191 31.9
SHI15390 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-12 77.4 211 30.3
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-12 77.0 216 32.4
SHI23673 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-12 76.6 211 30.3
SHI27632 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-12 76.6 216 31.0
SHI40520 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-12 76.6 216 30.6
Manes.05G187732 Manihot esculenta HOM05D007305 ORTHO05D009886 3.5e-12 76.3 113 44.2
SHI27215 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-12 76.3 216 33.3
SHI34552 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-12 76.3 222 32.0
SHI14291 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-12 75.5 216 29.2
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-12 75.5 218 31.2
SHI32732 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-12 75.5 220 30.5
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 7.7e-12 75.1 109 47.7
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 7.7e-12 75.1 230 29.1
SHI02940 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-12 75.1 216 31.9
SHI06777 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-12 75.1 216 31.9
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-12 75.1 216 31.9
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-12 75.1 211 30.8
SHI29361 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-11 74.7 221 31.2
Manes.12G129950 Manihot esculenta HOM05D000002 ORTHO05D000001 1.3e-11 74.3 224 30.4
SHI12381 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-11 74.3 184 34.2
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-11 73.9 216 31.0
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-11 73.9 211 30.3
SHI01799 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-11 73.2 210 29.5
SHI06528 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-11 73.2 216 29.2
SHI14540 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-11 72.8 216 31.0
SHI14921 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-11 72.8 216 30.1
SHI16752 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-11 72.4 216 31.5
SHI03781 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-11 72.0 216 30.6
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 6.5e-11 72.0 221 28.5
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 6.5e-11 72.0 221 28.5
Gorai.006G052700 Gossypium raimondii HOM05D056255 ORTHO05D047221 1.1e-10 71.2 183 35.0
SHI12565 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-10 71.2 211 30.8
SHI24173 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.9 216 29.2
SHI27844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.9 225 30.7
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 1.9e-10 70.5 117 44.4
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 2.5e-10 70.1 82 51.2
SHI23873 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-10 70.1 216 31.0
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 3.2e-10 69.7 226 27.0
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-10 69.7 216 30.1
SHI27053 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-10 69.7 223 30.0
SHI27433 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-10 69.7 84 44.0
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-10 69.7 216 31.0
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 4.2e-10 69.3 84 50.0
Manes.16G035125 Manihot esculenta HOM05D007305 ORTHO05D009886 4.2e-10 69.3 124 41.1
SHI03307 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-10 69.3 216 30.6
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-10 69.3 220 29.1
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-10 68.9 211 28.9
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-10 68.9 82 51.2
SHI15625 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-10 68.6 216 29.6
SHI10616 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-10 68.2 211 29.9
SHI24178 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-10 68.2 216 29.2
SHI15483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-09 67.8 218 29.4
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 1.6e-09 67.4 243 29.6
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-09 67.4 219 30.6
SHI41210 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-09 67.4 216 28.7
SHI14497 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-09 67.0 218 31.2
SHI47361 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-09 67.0 216 29.2
Gohir.D02G188650 Gossypium hirsutum HOM05D062835 ORTHO05D009886 2.7e-09 66.6 82 47.6
SHI07508 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-09 66.6 216 29.6
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-09 66.6 84 53.6
SHI26358 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-09 66.2 213 30.0
Manes.16G056009 Manihot esculenta HOM05D000002 ORTHO05D000001 6.1e-09 65.5 230 26.5
Gorai.005G211400 Gossypium raimondii HOM05D062835 ORTHO05D009886 8.0e-09 65.1 82 47.6
SHI14439 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-09 65.1 215 29.8
SHI06859 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 64.7 211 28.0
SHI05330 Sapria himalayana HOM05D001596 ORTHO05D000001 1.4e-08 64.3 216 29.6
SHI26716 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-08 64.3 217 27.2
SHI10701 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-08 63.9 216 28.7
SHI32183 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-08 63.9 188 31.4
SHI33187 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-08 63.9 216 28.2
SHI50423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-08 63.9 214 28.5
Oeu056823.1 Olea europaea HOM05D023524 ORTHO05D009886 2.3e-08 63.5 137 32.1
SHI05993 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 63.2 203 28.6
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 63.2 216 30.6
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-08 62.8 250 28.4
SHI09499 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-08 62.8 209 28.2
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-08 62.8 217 29.0
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 4.0e-08 62.8 78 41.0
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.2e-08 62.4 257 29.2
SHI01243 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-08 62.4 150 32.0
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-08 62.4 178 32.0
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.8e-08 62.0 239 25.5
SEGI_41209 Sequoiadendron giganteum HOM05D001800 ORTHO05D000047 6.8e-08 62.0 224 25.4
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 6.8e-08 62.0 78 41.0
SHI09366 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-08 61.6 211 26.5
SEGI_33603 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.8e-08 61.6 224 25.9
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-07 61.2 233 24.9
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.5e-07 60.8 233 25.3
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.8 216 27.8
SHI16988 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 60.8 64 54.7
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.0e-07 60.5 233 24.9
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 2.0e-07 60.5 116 37.1
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 2.6e-07 60.1 30 96.7
SHI30603 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-07 60.1 212 27.8
SEGI_28989 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.6e-07 60.1 228 28.5
SHI38366 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-07 59.7 214 28.5
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 5.7e-07 58.9 199 32.2
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 58.9 177 32.2
SHI32815 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-07 58.9 211 28.9
SEGI_17012 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.7e-07 58.9 224 25.0
Sopen05g013450 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 58.9 75 45.3
Sopen11g018000 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-07 58.9 75 45.3
SHI00649 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-07 58.5 210 32.9
SHI17822 Sapria himalayana HOM05D000002 ORTHO05D009886 7.5e-07 58.5 216 25.9
SHI32533 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-07 58.5 145 32.4
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.5e-07 58.5 252 29.4
SHI49078 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-07 58.2 211 28.0
SEGI_03840 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.8e-07 58.2 224 25.9
vmacro03330 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 9.8e-07 58.2 112 35.7
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 1.7e-06 57.4 107 34.6
SHI01660 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 57.0 172 30.8
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 2.2e-06 57.0 192 29.2
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 2.2e-06 57.0 165 32.1
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 2.8e-06 56.6 194 30.4
SEGI_10748 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.8e-06 56.6 224 25.9
HPP92_023007 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.8e-06 56.6 262 25.2
SHI14336 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 144 32.6
ECA246G1370 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-06 55.8 236 26.3
MD01G1096500 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-06 55.8 222 26.6
SHI22286 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-06 55.8 208 27.4
SHI34006 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-06 55.8 150 33.3
SHI35060 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-06 55.8 114 30.7
SHI11084 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 55.5 183 30.1
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.3e-06 55.1 208 27.9


User provided reference genes

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