Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 6.3e-199 697.2 344 100.0
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 2.1e-141 506.1 342 69.0
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 3.5e-141 505.4 343 68.5
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.3e-140 503.4 341 69.8
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 1.3e-140 503.4 341 69.2
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.3e-140 503.4 341 71.0
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.1e-139 500.4 341 68.9
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.5e-139 499.2 339 70.2
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 7.3e-139 497.7 340 69.4
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 1.3e-138 496.9 341 69.2
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 6.2e-138 494.6 341 69.8
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 8.1e-138 494.2 345 67.5
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 8.1e-138 494.2 343 69.1
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 8.1e-138 494.2 347 68.6
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 1.1e-137 493.8 342 68.7
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.1e-137 493.8 338 68.3
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 1.4e-137 493.4 341 68.9
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 1.4e-137 493.4 346 68.8
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.4e-137 493.4 343 69.1
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 2.4e-137 492.7 341 68.6
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 2.4e-137 492.7 344 69.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 2.4e-137 492.7 342 69.6
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 9.0e-137 490.7 341 68.3
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 1.2e-136 490.3 340 67.9
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 1.5e-136 490.0 340 68.2
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 2.0e-136 489.6 345 66.7
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 2.6e-136 489.2 345 67.8
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 4.5e-136 488.4 340 67.6
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 7.6e-136 487.6 340 68.2
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 4.9e-135 485.0 351 67.8
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 1.4e-134 483.4 355 66.2
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.1e-133 479.6 341 66.3
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 1.8e-132 476.5 344 67.2
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 1.8e-132 476.5 345 67.8
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 2.3e-132 476.1 345 65.2
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 5.1e-132 474.9 342 66.4
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.1e-131 473.8 389 61.2
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 1.3e-130 470.3 339 64.9
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 2.1e-130 469.5 352 65.3
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 2.8e-130 469.2 335 63.6
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 2.8e-130 469.2 343 64.4
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 3.7e-130 468.8 333 64.3
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 4.8e-130 468.4 341 66.6
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 6.2e-130 468.0 339 66.1
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 8.1e-130 467.6 335 63.9
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.4e-129 466.8 341 66.3
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 1.4e-129 466.8 339 65.2
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 1.8e-129 466.5 341 66.3
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 1.8e-129 466.5 339 64.6
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 3.1e-129 465.7 332 63.6
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 3.1e-129 465.7 333 64.6
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 3.1e-129 465.7 340 64.4
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.0e-129 465.3 333 64.0
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 5.3e-129 464.9 339 62.8
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 5.3e-129 464.9 339 66.1
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 9.0e-129 464.2 342 64.6
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.2e-128 463.8 339 64.3
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 2.6e-128 462.6 332 63.0
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.6e-128 462.6 340 63.2
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 3.4e-128 462.2 332 63.9
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 3.4e-128 462.2 336 63.1
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 3.4e-128 462.2 330 66.1
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.6e-128 461.1 330 65.8
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 7.6e-128 461.1 330 65.5
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 3.8e-127 458.8 340 62.6
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 8.4e-127 457.6 336 66.7
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 1.1e-126 457.2 333 62.8
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 1.4e-126 456.8 343 64.1
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 4.2e-126 455.3 341 63.9
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.2e-125 453.8 330 65.2
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.2e-125 453.8 330 64.8
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 1.6e-125 453.4 336 63.1
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 3.5e-125 452.2 336 62.8
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 4.6e-125 451.8 339 62.5
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 6.0e-125 451.4 336 63.7
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 6.0e-125 451.4 343 66.8
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 7.9e-125 451.1 333 63.7
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 3.9e-124 448.7 334 61.4
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-123 447.2 330 63.6
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.9e-123 446.4 335 61.8
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 1.9e-123 446.4 344 61.3
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 1.6e-122 443.4 334 62.6
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 3.7e-122 442.2 365 59.7
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 4.1e-121 438.7 329 62.6
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.6e-120 436.0 335 63.3
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.6e-120 436.0 342 61.4
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 4.5e-120 435.3 344 60.2
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.3e-119 433.7 340 60.6
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 3.2e-118 429.1 339 60.2
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 5.5e-118 428.3 346 61.6
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 9.3e-118 427.6 343 58.0
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 6.1e-117 424.9 340 58.8
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 1.5e-115 420.2 339 60.2
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 2.8e-114 416.0 378 55.3
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 2.2e-111 406.4 347 57.6
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 1.9e-110 403.3 350 59.4
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 7.2e-110 401.4 336 59.5
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 4.6e-109 398.7 342 55.8
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 8.8e-108 394.4 343 57.1
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 2.5e-107 392.9 344 59.0
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 4.3e-107 392.1 354 53.1
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 1.4e-105 387.1 440 47.3
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 2.4e-105 386.3 289 65.7
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 1.3e-103 380.6 354 55.9
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 6.7e-100 368.2 263 66.9
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 7.4e-99 364.8 348 51.7
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 1.2e-96 357.5 260 66.5
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 1.2e-93 347.4 257 65.0
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 6.3e-90 335.1 293 60.1
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.0e-79 301.2 234 59.8
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.6e-77 293.9 183 74.3
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.6e-77 293.9 183 74.3
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 3.3e-70 269.6 343 40.8
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 4.7e-69 265.8 346 39.6
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 5.4e-65 252.3 199 61.8
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 8.6e-63 245.0 331 39.0
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 5.8e-51 205.7 194 53.1
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.6e-47 191.8 183 52.5
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.3e-46 189.9 258 36.8
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 4.7e-45 186.0 179 55.9
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.4e-44 184.5 175 54.9
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.2e-41 173.3 173 51.4
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.9e-39 166.4 202 42.6
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 3.1e-28 130.2 81 70.4
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 3.4e-19 100.1 129 38.0
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.3e-18 98.2 68 63.2
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.3e-18 98.2 68 63.2
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.3e-18 98.2 68 63.2
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.1e-17 95.1 68 61.8
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.9e-14 84.3 106 38.7
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 7.4e-14 82.4 74 52.7
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 7.4e-14 82.4 74 52.7
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.1e-12 78.6 99 43.4
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 1.7e-10 71.2 70 50.0
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.8e-10 70.1 70 50.0
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 6.5e-10 69.3 70 48.6
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.1e-09 68.6 67 47.8
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 7.1e-09 65.9 60 51.7
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.6e-08 64.7 54 51.9
SHI23126 Sapria himalayana HOM05D006263 ORTHO05D007549 1.1e-06 58.5 87 36.8


User provided reference genes

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