Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 4.1e-83 311.6 191 100.0
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 6.1e-26 121.7 142 48.6
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 6.7e-25 118.2 146 47.9
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 7.0e-22 108.2 155 43.9
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 2.2e-20 103.2 143 44.8
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 2.9e-20 102.8 146 44.5
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 8.5e-20 101.3 147 45.6
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 1.1e-19 100.9 147 43.5
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 1.9e-19 100.1 190 37.9
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 5.5e-19 98.6 144 44.4
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 9.4e-19 97.8 146 43.2
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 9.4e-19 97.8 146 43.2
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 9.4e-19 97.8 199 37.2
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 1.2e-18 97.4 147 42.9
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 3.6e-18 95.9 136 43.4
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 4.7e-18 95.5 146 44.5
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 4.7e-18 95.5 135 53.3
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 6.1e-18 95.1 147 38.8
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 6.1e-18 95.1 152 41.4
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 8.0e-18 94.7 143 45.5
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 1.0e-17 94.4 148 41.2
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 1.0e-17 94.4 149 41.6
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 3.0e-17 92.8 148 41.2
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 3.0e-17 92.8 146 44.5
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 3.0e-17 92.8 148 43.2
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 4.0e-17 92.4 155 37.4
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.2e-16 90.9 148 43.2
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.0e-16 90.1 147 43.5
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.3e-16 89.4 148 43.2
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 4.4e-16 89.0 137 43.1
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 5.7e-16 88.6 147 42.9
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 5.7e-16 88.6 148 41.9
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 7.5e-16 88.2 147 42.9
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 3.7e-15 85.9 189 42.9
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 8.2e-15 84.7 151 41.7
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 1.1e-14 84.3 147 38.8
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 1.8e-14 83.6 143 42.0
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 1.8e-14 83.6 143 42.0
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 3.1e-14 82.8 134 47.8
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 4.1e-14 82.4 151 37.7
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 7.0e-14 81.6 144 39.6
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 7.0e-14 81.6 141 40.4
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 9.1e-14 81.3 200 33.5
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 9.1e-14 81.3 144 38.9
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 2.7e-13 79.7 150 40.7
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 2.2e-12 76.6 142 40.8
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 2.9e-12 76.3 146 38.4
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 6.5e-12 75.1 136 36.0
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 5.5e-11 72.0 135 37.0
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 9.4e-11 71.2 135 37.0
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 1.0e-09 67.8 146 36.3
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 1.4e-09 67.4 69 52.2
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 1.8e-09 67.0 134 37.3
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 6.8e-09 65.1 78 42.3
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 8.8e-09 64.7 130 33.1
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 2.0e-08 63.5 81 46.9
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 3.4e-08 62.8 78 46.2
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.4e-08 62.4 87 47.1
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 1.7e-07 60.5 116 37.1
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 8.3e-07 58.2 83 43.4
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 3.1e-06 56.2 78 42.3
ATR0829G136 Amborella trichopoda HOM05D003603 ORTHO05D004186 4.1e-06 55.8 76 36.8
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 5.4e-06 55.5 137 30.7
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 5.4e-06 55.5 154 28.6
BcaB07g30724 Brassica carinata HOM05D010619 ORTHO05D009830 9.1e-06 54.7 135 31.9


User provided reference genes

Program Settings