Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 0.0e+00 1304.3 678 100.0
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 3.3e-143 513.1 657 48.7
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 2.4e-141 506.9 707 47.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 5.0e-139 499.2 713 48.0
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.9e-138 497.3 703 45.9
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 3.3e-135 486.5 670 46.6
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 4.4e-135 486.1 713 47.4
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.1e-133 478.4 680 46.6
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.0e-131 474.9 680 47.5
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.0e-131 474.9 680 47.5
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.7e-131 474.2 647 47.4
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 2.0e-124 450.7 694 44.1
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 4.7e-121 439.5 686 45.6
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 6.1e-121 439.1 704 42.9
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 2.5e-114 417.2 684 44.6
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 2.8e-113 413.7 671 43.5
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.3e-110 404.8 661 42.5
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 2.3e-107 394.0 658 43.2
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.4e-104 384.8 676 42.6
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 4.4e-103 379.8 689 42.5
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 1.3e-102 378.3 664 41.9
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 4.9e-102 376.3 691 41.4
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 7.0e-101 372.5 671 41.6
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.7e-99 367.9 700 40.1
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 8.6e-99 365.5 668 41.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 4.3e-98 363.2 659 40.7
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 4.7e-97 359.8 653 40.6
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 1.5e-95 354.8 617 43.1
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 2.9e-94 350.5 713 39.1
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 2.9e-94 350.5 662 40.9
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 6.6e-91 339.3 637 40.8
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 1.8e-88 331.3 696 38.5
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 6.8e-88 329.3 638 37.3
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 6.8e-88 329.3 563 42.5
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 1.5e-87 328.2 705 37.9
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 3.4e-87 327.0 661 39.2
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 4.9e-86 323.2 712 37.5
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 4.6e-84 316.6 661 37.4
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 4.6e-84 316.6 624 38.0
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 5.1e-83 313.2 584 39.0
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 9.5e-82 308.9 651 38.2
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 3.6e-81 307.0 645 38.0
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 2.4e-80 304.3 709 36.4
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 3.4e-79 300.4 655 37.4
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 2.9e-78 297.4 715 35.7
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 8.4e-78 295.8 704 35.8
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 3.2e-77 293.9 700 36.0
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 3.5e-76 290.4 645 38.4
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 1.1e-74 285.4 641 37.6
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 1.2e-73 282.0 684 34.6
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 1.4e-72 278.5 669 36.6
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 4.0e-72 276.9 659 36.0
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 1.2e-71 275.4 466 42.5
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 1.5e-71 275.0 591 36.0
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.6e-71 274.2 667 34.2
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.7e-68 264.2 643 35.3
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.3e-67 261.2 697 34.6
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 2.5e-66 257.7 389 47.8
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 5.6e-66 256.5 719 33.8
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 7.3e-66 256.1 484 40.1
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 3.6e-65 253.8 707 34.2
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 9.0e-64 249.2 627 34.8
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 1.1e-61 242.3 671 34.4
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 5.4e-61 240.0 676 34.0
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 7.1e-61 239.6 579 34.9
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 3.5e-60 237.3 574 35.0
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 1.1e-58 232.3 660 33.9
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 9.6e-58 229.2 598 35.1
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 9.6e-58 229.2 660 33.5
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 6.2e-57 226.5 476 37.4
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 6.2e-57 226.5 601 33.6
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 8.1e-57 226.1 656 32.9
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 6.9e-56 223.0 683 32.2
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 7.6e-55 219.5 545 35.8
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 6.0e-52 209.9 486 35.0
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 2.3e-51 208.0 507 34.3
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 3.0e-51 207.6 633 31.0
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 2.5e-50 204.5 643 31.9
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 3.3e-50 204.1 655 33.1
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 5.6e-50 203.4 648 30.6
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 6.9e-48 196.4 666 30.2
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 2.9e-46 191.0 675 30.8
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 1.1e-45 189.1 719 29.1
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 1.4e-45 188.7 627 29.3
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 2.5e-45 188.0 643 30.2
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 4.2e-45 187.2 481 31.6
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 3.3e-42 177.6 253 45.5
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 3.3e-42 177.6 537 33.1
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 2.9e-38 164.5 592 30.6
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 1.9e-37 161.8 655 28.7
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 1.5e-34 152.1 498 30.7
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 4.8e-33 147.1 669 27.1
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 6.3e-33 146.7 523 31.5
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 1.1e-32 146.0 444 31.3
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 1.3e-30 139.0 497 31.0
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.2e-30 138.3 681 27.6
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 6.1e-28 130.2 422 31.3
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 8.2e-25 119.8 682 26.5
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 7.7e-23 113.2 413 28.8
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 1.7e-22 112.1 522 27.2
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 1.8e-19 102.1 576 26.0
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 5.7e-18 97.1 674 24.2
Duzib093G0367 Durio zibethinus HOM05D007315 ORTHO05D008940 1.6e-15 89.0 481 27.7
Actinidia39246 Actinidia chinensis HOM05D007315 ORTHO05D008940 2.2e-14 85.1 273 30.0
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 1.5e-13 82.4 397 27.5
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 1.8e-11 75.5 376 29.3
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 5.2e-11 73.9 205 34.1


User provided reference genes

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