Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2320 Cannabis sativa HOM05D007526 ORTHO05D009350 9.2e-106 387.1 226 100.0
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 9.4e-26 121.3 225 39.6
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 1.2e-25 120.9 228 41.2
FAN17G0331 Fragaria x ananassa HOM05D007526 ORTHO05D009350 4.7e-25 119.0 228 39.0
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 1.0e-24 117.9 228 39.5
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 6.7e-24 115.2 228 39.5
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 6.7e-24 115.2 246 37.0
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 4.4e-23 112.5 228 39.0
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 1.3e-22 110.9 245 38.4
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.2e-22 110.2 226 41.6
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 2.8e-22 109.8 230 41.7
MD13G1214200 Malus domestica HOM05D007526 ORTHO05D009350 1.2e-20 104.4 245 35.9
arahy.Tifrunner.gnm1.ann1.STCN49 Arachis hypogaea HOM05D007526 ORTHO05D009350 2.7e-20 103.2 229 39.7
arahy.Tifrunner.gnm1.ann1.582VFN Arachis hypogaea HOM05D007526 ORTHO05D009350 5.9e-20 102.1 228 39.0
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 1.0e-19 101.3 228 38.6
CsaV3_3G012050 Cucumis sativus L. HOM05D007526 ORTHO05D009350 1.3e-19 100.9 239 36.4
Manes.03G164000 Manihot esculenta HOM05D007526 ORTHO05D009350 1.7e-19 100.5 231 37.7
MELO3C006420.2 Cucumis melo HOM05D007526 ORTHO05D009350 2.9e-19 99.8 238 36.1
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 3.8e-19 99.4 226 36.3
TWI09G0237 Tripterygium wilfordii HOM05D007526 ORTHO05D009350 8.5e-19 98.2 229 35.4
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 1.1e-18 97.8 228 34.6
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 1.5e-18 97.4 230 41.7
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.9e-18 97.1 225 36.4
Manes.15G040900 Manihot esculenta HOM05D007526 ORTHO05D009350 4.2e-18 95.9 230 34.8
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 4.2e-18 95.9 226 35.4
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 9.4e-18 94.7 228 38.2
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 9.4e-18 94.7 225 39.1
Medtr1g042820 Medicago truncatula HOM05D007526 ORTHO05D009350 1.6e-17 94.0 226 35.0
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 2.7e-17 93.2 230 34.8
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 2.7e-17 93.2 229 34.5
TPR.G25185 Trifolium pratense HOM05D007526 ORTHO05D009350 2.7e-17 93.2 242 31.8
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 1.0e-16 91.3 226 34.5
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 1.0e-16 91.3 230 34.8
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 2.3e-16 90.1 230 34.8
Lalb_Chr19g0128211 Lupinus albus HOM05D007526 ORTHO05D009350 3.0e-16 89.7 230 36.5
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 1.2e-15 87.8 235 33.2
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 3.4e-15 86.3 229 34.9
VMungo0720G0856 Vigna mungo HOM05D007526 ORTHO05D009350 4.4e-15 85.9 262 31.7
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 7.5e-15 85.1 235 37.9
Sabra08G0127400 Salix brachista HOM05D007526 ORTHO05D009350 1.7e-14 84.0 214 35.0
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 2.2e-14 83.6 229 31.9
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 2.8e-14 83.2 229 31.9
Psat6g104840 Pisum sativum HOM05D007526 ORTHO05D009350 1.1e-13 81.3 233 33.9
QL06p018008 Quercus lobata HOM05D007526 ORTHO05D009350 1.4e-13 80.9 135 46.7
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 2.4e-13 80.1 233 33.0
Sed0008521 Sechium edule HOM05D007526 ORTHO05D009350 4.1e-13 79.3 237 32.5
Hma1.2p1_0267F.1_g107260 Hydrangea macrophylla HOM05D007526 ORTHO05D009350 9.1e-13 78.2 73 53.4
Phvul.007G273600 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 9.1e-13 78.2 249 32.5
Glyma.20G209600 Glycine max HOM05D007526 ORTHO05D009350 1.2e-12 77.8 221 31.7
CSS0016058 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 7.7e-12 75.1 228 33.3
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 1.3e-11 74.3 238 32.8
CSS0033898 Camellia sinensis var. sinensis HOM05D007526 ORTHO05D009350 2.9e-11 73.2 228 29.8
COL.COLO4_15878 Corchorus olitorius HOM05D007526 ORTHO05D009350 2.9e-11 73.2 85 49.4
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 5.0e-11 72.4 240 29.2
C04p41350 Brassica napus HOM05D007526 ORTHO05D009350 1.5e-10 70.9 54 72.2
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 1.5e-10 70.9 227 30.0
Carub.0007s2786 Capsella rubella HOM05D007526 ORTHO05D009350 1.9e-10 70.5 78 56.4
Cc03_g05540 Coffea canephora HOM05D007526 ORTHO05D009350 1.9e-10 70.5 231 29.0
Lj5g0022077 Lotus japonicus HOM05D007526 ORTHO05D009350 1.9e-10 70.5 240 30.0
BcaC02g09320 Brassica carinata HOM05D007526 ORTHO05D009350 3.2e-10 69.7 54 70.4
BolC4t25713H Brassica oleracea HOM05D007526 ORTHO05D009350 3.2e-10 69.7 54 70.4
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 3.2e-10 69.7 226 31.9
THA.LOC104808623 Tarenaya hassleriana HOM05D007526 ORTHO05D009350 4.2e-10 69.3 222 32.9
Thhalv10026764m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 5.5e-10 68.9 221 31.7
Sp7g12460 Schrenkiella parvula HOM05D007526 ORTHO05D009350 5.5e-10 68.9 54 70.4
CARHR220600 Cardamine hirsuta HOM05D007526 ORTHO05D009350 7.2e-10 68.6 224 31.7
BraA07t28719Z Brassica rapa HOM05D007526 ORTHO05D009350 9.4e-10 68.2 79 54.4
AT4G14380 Arabidopsis thaliana HOM05D007526 ORTHO05D009350 1.6e-09 67.4 54 68.5
BraA04t16457Z Brassica rapa HOM05D007526 ORTHO05D009350 4.7e-09 65.9 220 29.5
Thhalv10022185m.g Eutrema salsugineum HOM05D007526 ORTHO05D009350 4.7e-09 65.9 233 31.8
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 8.0e-09 65.1 236 28.8
BolC7t41918H Brassica oleracea HOM05D007526 ORTHO05D009350 8.0e-09 65.1 221 31.2
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 8.0e-09 65.1 238 29.4
Dinv27054 Davidia involucrata HOM05D007526 ORTHO05D009350 1.0e-08 64.7 71 53.5
Actinidia01843 Actinidia chinensis HOM05D007526 ORTHO05D009350 1.8e-08 63.9 41 78.0
AL7G41840 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 1.8e-08 63.9 220 30.5
A04p07660 Brassica napus HOM05D007526 ORTHO05D009350 1.8e-08 63.9 223 29.6
Medtr1g076110 Medicago truncatula HOM05D007526 ORTHO05D009350 1.8e-08 63.9 140 37.9
Sp3g20910 Schrenkiella parvula HOM05D007526 ORTHO05D009350 2.3e-08 63.5 225 30.2
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 4.0e-08 62.8 238 30.3
BcaB02g08612 Brassica carinata HOM05D007526 ORTHO05D009350 5.2e-08 62.4 223 28.7
TPR.G1498 Trifolium pratense HOM05D007526 ORTHO05D009350 5.2e-08 62.4 109 41.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 8.8e-08 61.6 224 29.5
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 1.2e-07 61.2 233 28.8
AL3G37924 Arabidopsis lyrata HOM05D007526 ORTHO05D009350 2.0e-07 60.5 54 61.1
Migut.G00517 Erythranthe guttata HOM05D007526 ORTHO05D009350 2.0e-07 60.5 120 38.3
C07p14270 Brassica napus HOM05D007526 ORTHO05D009350 3.4e-07 59.7 216 29.6
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 5.7e-07 58.9 232 27.2
Lalb_Chr10g0098881 Lupinus albus HOM05D007526 ORTHO05D009350 9.8e-07 58.2 80 50.0
Glyma.10G180900 Glycine max HOM05D007526 ORTHO05D009350 1.3e-06 57.8 228 27.6
AUR62015571 Chenopodium quinoa HOM05D007526 ORTHO05D009350 1.7e-06 57.4 137 33.6
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 1.7e-06 57.4 226 29.6
A07p09230 Brassica napus HOM05D007526 ORTHO05D009350 2.8e-06 56.6 218 29.4


User provided reference genes

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