Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2225 Cannabis sativa HOM05D009472 ORTHO05D000137 1.2e-86 323.2 162 100.0
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 4.9e-77 291.2 162 90.7
CANSAT25G1319 Cannabis sativa HOM05D000679 ORTHO05D000137 2.1e-75 285.8 162 91.4
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 8.7e-74 280.4 157 90.4
CANSAT01G3183 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-21 107.1 124 41.9
CANSAT56G1455 Cannabis sativa HOM05D054789 ORTHO05D000137 2.7e-19 99.4 108 45.4
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 1.0e-18 97.4 132 40.2
CANSAT35G1242 Cannabis sativa HOM05D000679 ORTHO05D000137 1.0e-18 97.4 134 38.8
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 1.0e-18 97.4 132 38.6
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-18 97.1 131 37.4
CANSAT78G0078 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-18 97.1 131 37.4
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-18 97.1 131 37.4
CANSAT11G0653 Cannabis sativa HOM05D009472 ORTHO05D000137 3.0e-18 95.9 126 38.1
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 8.8e-18 94.4 144 38.9
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 1.5e-17 93.6 122 38.5
CANSAT54G2657 Cannabis sativa HOM05D009472 ORTHO05D000137 4.8e-16 88.6 120 38.3
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 8.3e-16 87.8 141 36.9
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 9.1e-15 84.3 130 36.2
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.6e-14 83.6 130 37.7
CANSAT78G0118 Cannabis sativa HOM05D009472 ORTHO05D000137 2.0e-14 83.2 100 42.0
SGA_v2.0_scaffold11G05593 Striga asiatica HOM05D002262 ORTHO05D000482 1.7e-13 80.1 112 39.3
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.2e-13 79.7 138 34.8
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.5e-12 77.0 127 35.4
CAN.G1344.11 Capsicum annuum HOM05D000679 ORTHO05D000482 2.5e-12 76.3 88 37.5
CANSAT50G0005 Cannabis sativa HOM05D009472 ORTHO05D000137 4.2e-12 75.5 126 31.7
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 4.2e-12 75.5 130 36.2
CANSAT21G0042 Cannabis sativa HOM05D009472 ORTHO05D000137 5.5e-12 75.1 106 35.8
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 5.5e-12 75.1 118 37.3
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 5.5e-12 75.1 131 35.1
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 7.2e-12 74.7 127 35.4
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 7.2e-12 74.7 127 35.4
CANSAT54G1268 Cannabis sativa HOM05D008897 ORTHO05D000137 9.5e-12 74.3 133 36.1
SGA_v2.0_scaffold2471G54126 Striga asiatica HOM05D000679 ORTHO05D000137 1.2e-11 73.9 131 35.1
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-11 73.6 138 32.6
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 1.6e-11 73.6 118 36.4
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 2.1e-11 73.2 132 34.1
CANSAT78G2189 Cannabis sativa HOM05D000679 ORTHO05D000137 2.7e-11 72.8 130 36.2
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 3.6e-11 72.4 127 33.9
SGA_v2.0_scaffold126G33830 Striga asiatica HOM05D000679 ORTHO05D000137 3.6e-11 72.4 122 36.1
SGA_v2.0_scaffold59G20643 Striga asiatica HOM05D000679 ORTHO05D000137 3.6e-11 72.4 122 36.1
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 1.0e-10 70.9 114 36.8
SGA_v2.0_scaffold178G39480 Striga asiatica HOM05D002262 ORTHO05D000137 1.0e-10 70.9 122 36.1
Oeu043719.1 Olea europaea HOM05D011057 ORTHO05D013047 1.4e-10 70.5 130 30.8
PGSC0003DMG400044863 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.8e-10 70.1 90 37.8
CANSAT78G0758 Cannabis sativa HOM05D008721 ORTHO05D000137 2.3e-10 69.7 117 37.6
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 3.0e-10 69.3 114 36.0
Nitab4.5_0005382g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 4.0e-10 68.9 143 33.6
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 4.0e-10 68.9 118 35.6
Nitab4.5_0014346g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 5.2e-10 68.6 139 29.5
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-10 67.8 134 32.8
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-10 67.8 134 32.1
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-10 67.8 134 32.1
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-10 67.8 134 32.1
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 8.8e-10 67.8 134 32.1
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.8e-10 67.8 90 34.4
SGA_v2.0_scaffold2356G54104 Striga asiatica HOM05D000679 ORTHO05D000137 8.8e-10 67.8 97 40.2
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-09 67.4 134 32.1
CAN.G308.46 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-09 67.4 127 32.3
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 2.0e-09 66.6 114 36.0
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.0e-09 66.6 135 29.6
CANSAT80G0461 Cannabis sativa HOM05D008721 ORTHO05D000137 2.6e-09 66.2 123 35.0
SGA_v2.0_scaffold76G25157 Striga asiatica HOM05D002262 ORTHO05D000137 2.6e-09 66.2 88 40.9
CANSAT35G0678 Cannabis sativa HOM05D009472 ORTHO05D000137 3.4e-09 65.9 58 50.0
CAN.G649.11 Capsicum annuum HOM05D000679 ORTHO05D000137 4.4e-09 65.5 154 29.9
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 4.4e-09 65.5 119 31.1
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 7.5e-09 64.7 141 29.8
CANSAT25G1307 Cannabis sativa HOM05D008721 ORTHO05D000137 1.3e-08 63.9 111 36.0
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-08 63.5 121 28.9
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-08 62.8 130 33.8
Nitab4.5_0005355g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-08 62.4 119 33.6
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.7e-08 62.4 138 29.7
SGA_v2.0_scaffold10G05387 Striga asiatica HOM05D002262 ORTHO05D000137 4.9e-08 62.0 84 41.7
Nitab4.5_0011140g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.3e-08 61.6 87 33.3
Nitab4.5_0016795g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 6.3e-08 61.6 96 34.4
Nitab4.5_0005705g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 8.3e-08 61.2 130 30.8
CAN.G321.49 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-07 60.8 96 34.4
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-07 60.8 139 27.3
Nitab4.5_0000514g0180 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.1e-07 60.8 103 36.9
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.1e-07 60.8 147 29.3
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-07 60.8 130 27.7
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.4e-07 60.5 137 30.7
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 1.8e-07 60.1 132 29.5
Sc12g0009830 Simmondsia chinensis HOM05D011919 ORTHO05D014264 1.8e-07 60.1 128 26.6
CANSAT25G1221 Cannabis sativa HOM05D008636 ORTHO05D000137 4.1e-07 58.9 121 31.4
CANSAT35G0233 Cannabis sativa HOM05D008636 ORTHO05D000137 4.1e-07 58.9 135 28.1
CAN.G522.6 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 96 33.3
Solyc11g042980.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 5.4e-07 58.5 110 33.6
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.0e-07 58.2 126 29.4
Oeu032768.1 Olea europaea HOM05D011057 ORTHO05D013047 7.0e-07 58.2 79 38.0
Solyc11g056293.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 7.0e-07 58.2 134 31.3
Nitab4.5_0003934g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.2e-07 57.8 99 30.3
Solyc09g061400.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.2e-07 57.8 134 32.1
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 9.2e-07 57.8 134 32.1
CAN.G707.16 Capsicum annuum HOM05D002262 ORTHO05D000137 1.2e-06 57.4 86 33.7
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 1.2e-06 57.4 134 32.1
Nitab4.5_0000864g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.0e-06 56.6 112 29.5
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 2.0e-06 56.6 89 33.7
Solyc08g150114.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 2.7e-06 56.2 134 31.3
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 2.7e-06 56.2 134 32.1
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 2.7e-06 56.2 134 32.1
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 2.7e-06 56.2 134 32.1
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.5e-06 55.8 119 31.1
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 3.5e-06 55.8 134 32.1
Nitab4.5_0004940g0100 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.5e-06 55.5 121 27.3
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.5e-06 55.5 135 26.7
Oeu044845.1 Olea europaea HOM05D002749 ORTHO05D000708 4.5e-06 55.5 98 28.6
Sc20g0001920 Simmondsia chinensis HOM05D011919 ORTHO05D014264 4.5e-06 55.5 128 27.3
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 5.9e-06 55.1 74 43.2
Nitab4.5_0001707g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.9e-06 55.1 126 27.8
Nitab4.5_0007565g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 5.9e-06 55.1 100 32.0
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.7e-06 54.7 137 29.2


User provided reference genes

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