Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2212 Cannabis sativa HOM05D000395 ORTHO05D000088 3.3e-95 351.7 175 100.0
CANSAT78G1549 Cannabis sativa HOM05D000395 ORTHO05D000088 2.3e-88 328.9 165 98.8
CANSAT01G1395 Cannabis sativa HOM05D000395 ORTHO05D000088 3.9e-80 301.6 171 89.5
CANSAT01G3124 Cannabis sativa HOM05D000395 ORTHO05D000088 7.5e-47 191.0 158 63.3
CANSAT01G2152 Cannabis sativa HOM05D000395 ORTHO05D000088 6.6e-43 177.9 168 58.3
CANSAT01G0803 Cannabis sativa HOM05D000395 ORTHO05D000088 2.1e-41 172.9 167 55.7
CANSAT25G0482 Cannabis sativa HOM05D000395 ORTHO05D000088 6.6e-35 151.4 160 55.0
CANSAT01G1900 Cannabis sativa HOM05D019975 ORTHO05D000088 1.5e-31 140.2 169 50.9
CANSAT01G0582 Cannabis sativa HOM05D000395 ORTHO05D000088 7.0e-29 131.3 97 70.1
CANSAT56G1143 Cannabis sativa HOM05D019975 ORTHO05D000088 5.0e-27 125.2 175 44.6
CANSAT78G0477 Cannabis sativa HOM05D000395 ORTHO05D000088 1.5e-26 123.6 97 68.0
CANSAT01G2637 Cannabis sativa HOM05D019975 ORTHO05D000088 3.3e-26 122.5 157 48.4
CANSAT78G1395 Cannabis sativa HOM05D000395 ORTHO05D000088 4.7e-25 118.6 110 56.4
CANSAT01G2675 Cannabis sativa HOM05D000395 ORTHO05D000088 8.1e-25 117.9 170 42.9
CANSAT01G0137 Cannabis sativa HOM05D000395 ORTHO05D000088 3.7e-22 109.0 168 45.8
CANSAT01G3168 Cannabis sativa HOM05D000395 ORTHO05D000088 4.9e-22 108.6 168 46.4
CANSAT01G1431 Cannabis sativa HOM05D000395 ORTHO05D000088 1.4e-21 107.1 177 41.8
CANSAT01G3239 Cannabis sativa HOM05D000395 ORTHO05D000088 6.2e-17 91.7 155 40.0
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 1.7e-11 73.6 94 42.6
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 8.6e-11 71.2 138 33.3
Lalb_Chr10g0095151 Lupinus albus HOM05D000395 ORTHO05D000088 4.3e-10 68.9 90 36.7
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 5.6e-10 68.6 93 38.7
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.6e-09 67.0 95 36.8
FvH4_1g14680 Fragaria vesca HOM05D000395 ORTHO05D000088 2.1e-09 66.6 95 35.8
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.1e-09 66.6 95 35.8
Lalb_Chr10g0095161 Lupinus albus HOM05D000395 ORTHO05D000088 3.6e-09 65.9 92 34.8
RcHm_v2.0_Chr2g0103541 Rosa chinensis HOM05D000395 ORTHO05D000088 4.7e-09 65.5 100 39.0
CANSAT01G0142 Cannabis sativa HOM05D000395 ORTHO05D000088 8.1e-09 64.7 46 76.1
RcHm_v2.0_Chr2g0103491 Rosa chinensis HOM05D000395 ORTHO05D000088 8.1e-09 64.7 92 37.0
Prupe.1G579400 Prunus persica HOM05D000395 ORTHO05D000088 1.4e-08 63.9 92 33.7
QL06p043901 Quercus lobata HOM05D000395 ORTHO05D000088 1.4e-08 63.9 100 34.0
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 2.4e-08 63.2 157 29.3
arahy.Tifrunner.gnm1.ann1.68615N Arachis hypogaea HOM05D000395 ORTHO05D000088 3.1e-08 62.8 139 32.4
Manes.10G033500 Manihot esculenta HOM05D000395 ORTHO05D000088 3.1e-08 62.8 100 37.0
Sabra01G0175400 Salix brachista HOM05D000395 ORTHO05D000088 3.1e-08 62.8 156 33.3
PSO675G3266 Papaver somniferum HOM05D000395 ORTHO05D000088 4.0e-08 62.4 104 35.6
arahy.Tifrunner.gnm1.ann1.B2IBRN Arachis hypogaea HOM05D000395 ORTHO05D000088 5.2e-08 62.0 139 32.4
FvH4_6g38700 Fragaria vesca HOM05D000395 ORTHO05D000088 8.9e-08 61.2 92 37.0
Potri.004G230100 Populus trichocarpa HOM05D000395 ORTHO05D000088 8.9e-08 61.2 124 36.3
QL06p043952 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-08 61.2 127 35.4
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 1.2e-07 60.8 160 30.6
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.2e-07 60.8 160 30.6
PSO541G5266 Papaver somniferum HOM05D000395 ORTHO05D000088 3.4e-07 59.3 105 34.3
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 4.4e-07 58.9 160 28.1
PSO541G4430 Papaver somniferum HOM05D000395 ORTHO05D000088 7.6e-07 58.2 106 34.0
TPR.G14716 Trifolium pratense HOM05D000395 ORTHO05D000088 7.6e-07 58.2 95 33.7
Gohir.A08G223600 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.9e-07 57.8 100 31.0
Gorai.004G260200 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.9e-07 57.8 100 31.0
Phvul.007G019600 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 1.7e-06 57.0 124 33.1
Psat6g097800 Pisum sativum HOM05D000395 ORTHO05D000088 1.7e-06 57.0 83 39.8
Medtr7g050590 Medicago truncatula HOM05D000395 ORTHO05D000088 2.2e-06 56.6 127 34.6
Manes.10G031300 Manihot esculenta HOM05D000395 ORTHO05D000088 4.9e-06 55.5 92 34.8
Prupe.6G229600 Prunus persica HOM05D000395 ORTHO05D000088 4.9e-06 55.5 67 38.8
QL06p022438 Quercus lobata HOM05D000395 ORTHO05D000088 4.9e-06 55.5 99 32.3
Phvul.003G033400 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 8.4e-06 54.7 122 34.4


User provided reference genes

Program Settings