Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2183 Cannabis sativa HOM05D000005 ORTHO05D010574 4.4e-261 904.0 445 100.0
CANSAT01G0874 Cannabis sativa HOM05D000005 ORTHO05D000012 7.8e-125 451.4 465 54.4
Prupe.7G065400 Prunus persica HOM05D000005 ORTHO05D000012 2.4e-41 174.1 457 31.3
RcHm_v2.0_Chr1g0317981 Rosa chinensis HOM05D000005 ORTHO05D010574 4.5e-40 169.9 487 29.0
MD12G1068700 Malus domestica HOM05D000005 ORTHO05D010574 4.1e-33 146.7 495 28.1
QL04p027112 Quercus lobata HOM05D000005 ORTHO05D010574 1.3e-31 141.7 463 28.7
Cfa011656 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.5e-30 138.3 470 28.5
Haze_17817 Corylus avellana HOM05D000005 ORTHO05D010574 4.3e-30 136.7 442 28.5
QL04p027472 Quercus lobata HOM05D000005 ORTHO05D010574 5.6e-30 136.3 472 27.5
RcHm_v2.0_Chr4g0429711 Rosa chinensis HOM05D000005 ORTHO05D010574 1.4e-28 131.7 373 29.5
QL05p082212 Quercus lobata HOM05D000005 ORTHO05D010574 8.9e-28 129.0 396 26.8
Haze_17730 Corylus avellana HOM05D000005 ORTHO05D010574 9.8e-27 125.6 440 26.1
CANSAT78G1597 Cannabis sativa HOM05D000005 ORTHO05D010574 1.7e-26 124.8 430 26.0
Haze_17731 Corylus avellana HOM05D000005 ORTHO05D010574 1.4e-25 121.7 452 24.6
Haze_17828 Corylus avellana HOM05D000005 ORTHO05D010574 1.9e-25 121.3 397 27.7
RcHm_v2.0_Chr4g0429701 Rosa chinensis HOM05D000005 ORTHO05D000012 3.2e-25 120.6 467 25.5
Cfa018268 Carpinus fangiana HOM05D000005 ORTHO05D010574 2.7e-24 117.5 402 26.4
Haze_17813 Corylus avellana HOM05D000005 ORTHO05D010574 5.0e-23 113.2 414 26.1
FAN28G1466 Fragaria x ananassa HOM05D000005 ORTHO05D012233 8.6e-23 112.5 486 25.1
QL09p004694 Quercus lobata HOM05D000005 ORTHO05D010574 8.6e-23 112.5 397 25.7
Cfa008053 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.9e-22 111.3 219 36.1
MD05G1002200 Malus domestica HOM05D000005 ORTHO05D010574 1.9e-22 111.3 417 27.3
QL03p068834 Quercus lobata HOM05D000005 ORTHO05D010574 1.9e-22 111.3 263 33.1
Cfa011658 Carpinus fangiana HOM05D000005 ORTHO05D010574 9.5e-22 109.0 179 39.7
Cfa018270 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.6e-21 108.2 469 24.9
Haze_24261 Corylus avellana HOM05D000005 ORTHO05D010574 1.6e-21 108.2 179 39.7
Cfa018269 Carpinus fangiana HOM05D000005 ORTHO05D010574 2.1e-21 107.8 387 27.4
QL09p003267 Quercus lobata HOM05D000005 ORTHO05D010574 3.6e-21 107.1 392 26.5
MELO3C022148.2 Cucumis melo HOM05D000005 ORTHO05D014598 8.1e-21 105.9 443 26.2
RcHm_v2.0_Chr2g0124621 Rosa chinensis HOM05D000005 ORTHO05D012233 8.1e-21 105.9 533 23.5
FAN23G0394 Fragaria x ananassa HOM05D000005 ORTHO05D012233 1.1e-20 105.5 461 24.1
FAN23G1303 Fragaria x ananassa HOM05D000005 ORTHO05D012233 1.8e-20 104.8 489 23.5
QL04p027965 Quercus lobata HOM05D000005 ORTHO05D010574 8.9e-20 102.4 165 41.8
Cfa011655 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.2e-19 102.1 180 38.3
FAN26G2122 Fragaria x ananassa HOM05D000005 ORTHO05D012233 2.0e-19 101.3 456 23.5
RcHm_v2.0_Chr6g0251631 Rosa chinensis HOM05D000005 ORTHO05D012233 2.0e-19 101.3 413 26.2
ClCG08G001380 Citrullus lanatus HOM05D000005 ORTHO05D014598 2.6e-19 100.9 426 24.2
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 2.6e-19 100.9 261 30.7
FAN19G0622 Fragaria x ananassa HOM05D000005 ORTHO05D012233 5.8e-19 99.8 494 23.5
Sed0009572 Sechium edule HOM05D000005 ORTHO05D014598 9.8e-19 99.0 435 24.4
FAN15G3532 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-18 98.2 424 26.9
RcHm_v2.0_Chr7g0223661 Rosa chinensis HOM05D000005 ORTHO05D000012 3.7e-18 97.1 410 26.6
RcHm_v2.0_Chr2g0106511 Rosa chinensis HOM05D000005 ORTHO05D012233 4.9e-18 96.7 507 23.5
CsaV3_5G039740 Cucumis sativus L. HOM05D000005 ORTHO05D014598 6.4e-18 96.3 435 24.4
RcHm_v2.0_Chr1g0342551 Rosa chinensis HOM05D000005 ORTHO05D010574 6.4e-18 96.3 460 24.6
Haze_17819 Corylus avellana HOM05D000005 ORTHO05D010574 1.1e-17 95.5 161 39.8
FAN19G0289 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.2e-17 94.0 517 22.4
Sed0026450 Sechium edule HOM05D000005 ORTHO05D014598 3.2e-17 94.0 411 24.6
FvH4_2g02050 Fragaria vesca HOM05D000005 ORTHO05D000012 1.2e-16 92.0 426 26.8
QL04p027745 Quercus lobata HOM05D000005 ORTHO05D010574 3.5e-16 90.5 159 35.2
MELO3C022150.2 Cucumis melo HOM05D000005 ORTHO05D014598 1.3e-15 88.6 389 23.9
QL04p027198 Quercus lobata HOM05D000005 ORTHO05D010574 5.1e-15 86.7 383 24.3
QL09p003167 Quercus lobata HOM05D000005 ORTHO05D010574 2.5e-14 84.3 108 41.7
QL04p027395 Quercus lobata HOM05D000083 ORTHO05D001732 3.3e-14 84.0 407 24.1
Haze_17818 Corylus avellana HOM05D000005 ORTHO05D010574 5.6e-14 83.2 387 24.8
CsaV3_5G039730 Cucumis sativus L. HOM05D000005 ORTHO05D014598 1.2e-13 82.0 412 23.1
RcHm_v2.0_Chr2g0106541 Rosa chinensis HOM05D000005 ORTHO05D012233 2.8e-13 80.9 182 29.7
CiPaw.16G076400 Carya illinoinensis HOM05D000005 ORTHO05D010574 2.3e-12 77.8 264 27.7
MELO3C025516.2 Cucumis melo HOM05D000005 ORTHO05D014598 6.8e-12 76.3 419 22.0
RcHm_v2.0_Chr6g0272741 Rosa chinensis HOM05D000005 ORTHO05D000012 6.8e-12 76.3 400 24.2
QL04p027572 Quercus lobata HOM05D000056 ORTHO05D000019 8.9e-12 75.9 147 33.3
QL09p004704 Quercus lobata HOM05D000005 ORTHO05D000012 1.2e-11 75.5 258 29.5
FvH4_1g16620 Fragaria vesca HOM05D000005 ORTHO05D012233 2.0e-11 74.7 391 25.6
MELO3C022144.2 Cucumis melo HOM05D000005 ORTHO05D019022 2.6e-11 74.3 423 21.5
CsaV3_5G039660 Cucumis sativus L. HOM05D000005 ORTHO05D019022 2.6e-11 74.3 424 21.7
QL09p004668 Quercus lobata HOM05D000005 ORTHO05D010574 2.6e-11 74.3 150 37.3
QL04p028099 Quercus lobata HOM05D000005 ORTHO05D010574 3.4e-11 73.9 198 30.8
FvH4_1g16650 Fragaria vesca HOM05D000005 ORTHO05D012233 4.4e-11 73.6 191 26.2
Cfa012834 Carpinus fangiana HOM05D000005 ORTHO05D010574 9.9e-11 72.4 135 38.5
Cfa011657 Carpinus fangiana HOM05D000005 ORTHO05D010574 3.7e-10 70.5 178 30.9
FvH4_1g16630 Fragaria vesca HOM05D000005 ORTHO05D012233 3.7e-10 70.5 182 26.9
QL04p027067 Quercus lobata HOM05D000083 ORTHO05D001732 8.4e-10 69.3 420 23.1
Prupe.7G065500 Prunus persica HOM05D000005 ORTHO05D010574 3.2e-09 67.4 192 28.1
Prupe.8G005400 Prunus persica HOM05D000005 ORTHO05D000012 4.1e-09 67.0 399 23.3
QL04p027190 Quercus lobata HOM05D000005 ORTHO05D013009 5.4e-09 66.6 208 28.4
FAN26G1463 Fragaria x ananassa HOM05D000005 ORTHO05D012233 1.6e-08 65.1 289 22.8
MD05G1002400 Malus domestica HOM05D000005 ORTHO05D012870 1.6e-08 65.1 313 24.3
Dinv27194 Davidia involucrata HOM05D009617 ORTHO05D010313 3.5e-08 63.9 392 23.7
FAN28G2233 Fragaria x ananassa HOM05D000005 ORTHO05D012233 3.5e-08 63.9 178 28.7
MD17G1192900 Malus domestica HOM05D000005 ORTHO05D000012 6.0e-08 63.2 399 22.3
QL05p028400 Quercus lobata HOM05D000005 ORTHO05D000012 7.8e-08 62.8 174 24.1
FAN28G1788 Fragaria x ananassa HOM05D000005 ORTHO05D012233 1.0e-07 62.4 189 24.9
QL05p028426 Quercus lobata HOM05D000005 ORTHO05D000012 1.3e-07 62.0 174 24.1
FAN04G2194 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.7e-07 61.6 435 19.8
QL03p063704 Quercus lobata HOM05D000005 ORTHO05D010574 1.7e-07 61.6 176 25.0
QL04p028127 Quercus lobata HOM05D000005 ORTHO05D010574 2.3e-07 61.2 105 36.2
ClCG08G001350 Citrullus lanatus HOM05D000005 ORTHO05D014598 3.9e-07 60.5 200 27.5
FAN28G0354 Fragaria x ananassa HOM05D001905 ORTHO05D001820 3.9e-07 60.5 189 24.3
ClCG08G001340 Citrullus lanatus HOM05D000005 ORTHO05D014598 5.1e-07 60.1 266 23.3
Sed0017103 Sechium edule HOM05D000005 ORTHO05D019022 5.1e-07 60.1 194 25.8
QL04p089183 Quercus lobata HOM05D000005 ORTHO05D000012 6.6e-07 59.7 170 24.1
QL04p027649 Quercus lobata HOM05D000005 ORTHO05D010574 8.6e-07 59.3 165 26.7
Prupe.8G005500 Prunus persica HOM05D000005 ORTHO05D000012 1.5e-06 58.5 168 26.8
FAN18G3744 Fragaria x ananassa HOM05D000005 ORTHO05D012870 5.6e-06 56.6 432 20.6


User provided reference genes

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