Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.6e-123 446.0 221 100.0
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.8e-106 389.4 217 87.1
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 4.0e-106 388.3 219 86.3
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 7.6e-105 384.0 221 85.1
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 2.2e-104 382.5 219 85.4
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.9e-104 382.1 219 84.5
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.4e-104 380.9 219 84.5
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 1.4e-103 379.8 217 84.8
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.5e-103 377.9 212 85.8
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 5.5e-103 377.9 217 85.3
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 7.1e-103 377.5 221 83.7
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 7.1e-103 377.5 217 83.9
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 9.3e-103 377.1 217 83.9
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 2.7e-102 375.6 217 82.9
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 3.5e-102 375.2 215 83.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 7.9e-102 374.0 217 82.5
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 1.8e-101 372.9 216 85.2
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 3.9e-101 371.7 217 81.6
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 5.1e-101 371.3 219 83.6
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 8.7e-101 370.5 217 82.9
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 8.7e-101 370.5 217 82.9
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 1.1e-100 370.2 219 84.0
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 1.5e-100 369.8 217 82.5
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.5e-100 369.8 217 82.0
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.9e-100 369.4 217 82.9
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 3.3e-100 368.6 214 83.6
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 3.3e-100 368.6 217 82.5
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 4.3e-100 368.2 214 84.1
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 4.3e-100 368.2 213 85.0
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 5.6e-100 367.9 215 83.3
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 9.6e-100 367.1 215 83.3
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.3e-99 366.7 214 82.2
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 2.8e-99 365.5 215 80.9
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.8e-99 365.5 215 80.9
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 3.7e-99 365.2 214 84.1
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 3.7e-99 365.2 217 82.0
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.8e-99 364.8 214 82.7
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 6.2e-99 364.4 213 81.7
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 8.1e-99 364.0 232 78.0
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 8.1e-99 364.0 213 81.7
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 3.1e-98 362.1 215 80.5
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 6.9e-98 360.9 215 80.0
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 6.9e-98 360.9 217 81.6
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 9.0e-98 360.5 217 80.6
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 2.0e-97 359.4 214 83.2
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 2.0e-97 359.4 215 80.9
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.6e-97 359.0 216 81.5
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 4.5e-97 358.2 216 81.0
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 4.5e-97 358.2 217 81.1
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 4.5e-97 358.2 218 78.0
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.7e-96 356.3 214 79.9
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 3.8e-96 355.1 212 79.7
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 4.9e-96 354.8 216 79.6
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 1.1e-95 353.6 216 77.8
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 1.4e-95 353.2 213 81.2
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.4e-95 353.2 218 79.4
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.9e-95 352.8 213 81.7
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.9e-95 352.8 215 80.0
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 3.2e-95 352.1 209 80.4
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 7.1e-95 350.9 216 77.3
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 9.3e-95 350.5 213 79.3
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.2e-94 350.1 215 80.0
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.6e-94 349.7 215 79.5
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 2.7e-94 349.0 202 83.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 2.7e-94 349.0 213 79.3
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 3.5e-94 348.6 215 80.0
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 4.6e-94 348.2 216 78.7
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 6.0e-94 347.8 213 79.3
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 7.9e-94 347.4 216 78.2
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 7.9e-94 347.4 215 80.5
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 7.9e-94 347.4 217 80.2
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-93 346.7 213 79.3
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 1.3e-93 346.7 213 79.3
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 3.0e-93 345.5 218 78.4
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 6.7e-93 344.4 213 78.9
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 6.7e-93 344.4 213 78.9
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 8.7e-93 344.0 218 75.2
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 8.7e-93 344.0 217 75.6
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 2.5e-92 342.4 215 78.1
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 2.5e-92 342.4 213 78.4
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 2.5e-92 342.4 217 78.8
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 5.7e-92 341.3 213 78.4
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 5.7e-92 341.3 213 78.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 4.1e-90 335.1 216 75.0
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 4.1e-90 335.1 211 78.2
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 2.5e-87 325.9 201 79.6
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 9.3e-87 323.9 213 74.6
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.3e-85 319.3 215 74.9
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 5.1e-85 318.2 201 76.6
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-84 317.0 217 75.1
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.8e-82 309.7 215 67.9
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 2.0e-81 306.2 217 71.0
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 2.6e-81 305.8 216 68.5
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 5.9e-81 304.7 207 73.4
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.3e-80 303.5 211 69.7
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 8.5e-80 300.8 193 77.7
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.4e-79 300.1 216 68.1
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 3.3e-76 288.9 188 77.1
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 8.2e-75 284.3 184 69.6
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 9.1e-74 280.8 219 66.7
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 9.1e-74 280.8 192 67.2
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.0e-73 279.6 265 59.6
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 2.2e-72 276.2 204 65.7
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.1e-71 273.9 191 67.5
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 7.4e-68 261.2 149 83.2
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.7e-67 260.0 151 82.8
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 2.2e-67 259.6 144 87.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 6.5e-64 248.1 149 80.5
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.1e-63 247.3 148 80.4
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 1.3e-56 223.8 177 57.6
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 5.5e-47 191.8 191 48.2
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.6e-46 190.3 103 89.3
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 2.0e-36 156.8 209 45.5
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 3.1e-29 132.9 85 71.8
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 2.9e-27 126.3 105 57.1
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.4e-26 123.2 66 84.8
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 6.0e-25 118.6 87 64.4
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 4.7e-22 109.0 68 75.0
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 8.1e-22 108.2 84 58.3
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 8.9e-21 104.8 79 69.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 4.0e-13 79.3 144 36.8
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.1e-07 61.2 41 63.4
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 4.3e-07 59.3 142 31.0
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 5.6e-07 58.9 141 27.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 7.3e-07 58.5 141 26.2
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 7.3e-07 58.5 141 26.2
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.6e-06 57.4 141 26.2
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 1.6e-06 57.4 38 63.2
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 2.8e-06 56.6 142 28.9


User provided reference genes

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