Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 8.4e-207 723.4 350 100.0
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-131 473.8 349 65.9
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 3.1e-129 465.7 349 65.3
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-128 463.8 349 65.0
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 2.5e-126 456.1 362 61.9
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 5.6e-126 454.9 350 63.7
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.6e-125 453.4 351 62.4
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.4e-124 450.3 351 63.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 5.2e-124 448.4 350 61.4
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 6.8e-124 448.0 349 62.8
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.5e-123 446.8 350 61.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.6e-123 446.0 348 62.1
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.7e-122 443.4 356 60.4
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.9e-122 442.6 348 63.2
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.9e-122 441.8 349 60.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.9e-122 441.8 351 62.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.1e-121 440.7 338 62.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.1e-121 440.7 338 62.4
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.4e-121 440.3 354 61.6
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.9e-121 439.9 351 62.1
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 5.4e-121 438.3 348 62.1
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 2.0e-120 436.4 367 58.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 3.5e-120 435.6 324 64.5
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 3.9e-119 432.2 350 60.9
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.9e-118 429.9 348 62.4
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.5e-118 429.5 351 61.3
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.5e-118 429.5 348 62.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 2.1e-117 426.4 353 60.1
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 8.0e-117 424.5 348 59.5
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.0e-117 424.5 349 60.5
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.1e-116 424.1 352 59.1
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 3.1e-116 422.5 322 62.4
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.1e-116 422.5 348 58.0
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.0e-116 422.2 354 60.7
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 5.2e-116 421.8 349 59.9
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 6.8e-116 421.4 323 63.5
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 7.5e-115 417.9 348 58.6
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 7.5e-115 417.9 346 59.0
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 9.8e-115 417.5 356 59.8
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.3e-114 417.2 350 60.9
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.7e-114 416.8 356 59.8
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.4e-113 413.7 349 58.7
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.4e-113 413.7 321 62.6
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.9e-113 413.3 348 60.1
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 3.2e-113 412.5 349 57.6
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 5.4e-113 411.8 357 57.4
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 7.0e-113 411.4 346 59.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.2e-112 410.6 346 59.0
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.1e-112 409.8 367 56.1
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 3.5e-112 409.1 349 58.2
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 2.3e-111 406.4 348 56.3
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 6.6e-111 404.8 348 56.3
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.5e-110 403.7 348 56.3
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 2.5e-110 402.9 348 55.5
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.3e-110 402.1 350 57.1
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 7.3e-110 401.4 352 56.0
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.2e-109 400.6 323 59.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.2e-109 400.6 350 56.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.1e-108 397.5 346 59.8
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 5.2e-108 395.2 346 57.5
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 8.9e-108 394.4 349 57.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.0e-107 393.3 349 55.9
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.0e-107 393.3 343 60.1
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.4e-107 392.5 352 54.3
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 4.4e-107 392.1 352 54.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.7e-106 390.2 369 52.3
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 4.1e-105 385.6 350 55.1
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 4.1e-105 385.6 354 53.7
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 5.4e-105 385.2 354 53.4
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.4e-105 385.2 335 56.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.1e-104 383.3 346 58.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 7.8e-104 381.3 353 56.9
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.3e-103 380.6 348 53.2
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.3e-103 380.6 348 53.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.0e-103 379.4 315 62.5
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 8.6e-103 377.9 275 64.4
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.5e-102 377.1 350 53.1
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.5e-102 377.1 349 55.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 7.3e-102 374.8 350 53.1
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.4e-100 369.8 383 49.9
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 6.8e-100 368.2 335 57.0
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 1.2e-99 367.5 372 49.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.2e-96 357.5 348 54.3
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 4.3e-94 349.0 324 56.2
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.6e-91 339.7 349 51.9
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 7.6e-91 338.2 275 63.6
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.7e-87 327.0 346 50.3
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 3.9e-87 325.9 315 55.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 1.6e-85 320.5 336 50.6
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.0e-84 315.8 249 61.4
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 2.6e-83 313.2 327 51.7
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.8e-83 312.0 250 62.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 5.8e-83 312.0 250 62.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 8.4e-82 308.1 354 50.0
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.9e-81 307.0 346 48.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.7e-80 303.1 248 58.9
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 6.2e-77 292.0 309 52.4
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 8.1e-77 291.6 352 46.6
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.8e-69 266.5 267 52.1
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.8e-68 263.8 264 51.1
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.2e-67 261.2 239 53.1
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.9e-65 253.8 184 59.8
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 9.3e-65 251.5 216 59.3
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.5e-64 249.6 190 62.1
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.5e-59 234.2 315 45.1
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 4.5e-59 232.6 357 37.8
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 7.7e-59 231.9 244 51.2
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 6.5e-42 175.6 131 61.1
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 7.4e-38 162.2 122 59.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 2.0e-35 154.1 321 36.1
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 7.5e-30 135.6 212 39.2
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 2.2e-29 134.0 100 63.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 5.0e-26 122.9 146 47.9
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 7.7e-19 99.0 73 57.5
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 8.0e-16 89.0 69 62.3
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 4.1e-12 76.6 205 28.8
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 9.2e-12 75.5 83 53.0


User provided reference genes

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