Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.1e-140 503.4 279 100.0
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 9.7e-65 251.1 267 55.4
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.4e-58 230.7 257 55.6
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 6.7e-58 228.4 255 53.7
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 6.7e-58 228.4 236 57.2
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 8.8e-58 228.0 236 58.1
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 8.8e-58 228.0 255 53.7
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 1.2e-57 227.6 255 54.9
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 1.5e-57 227.3 257 52.5
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 2.6e-57 226.5 255 53.3
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 7.5e-57 224.9 233 54.9
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.7e-56 223.8 259 55.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 1.7e-56 223.8 255 52.2
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 6.3e-56 221.9 240 52.9
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.4e-55 220.7 229 54.1
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 4.1e-55 219.2 246 50.0
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 2.0e-54 216.9 238 52.9
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 2.0e-54 216.9 232 53.0
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.7e-53 213.8 255 51.0
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.0e-53 212.2 241 53.5
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 5.0e-53 212.2 264 49.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 2.5e-52 209.9 248 50.8
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 3.2e-52 209.5 244 54.5
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 4.2e-52 209.1 244 50.8
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 5.5e-52 208.8 244 54.5
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 5.5e-52 208.8 265 48.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 1.5e-49 200.7 270 48.5
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 3.4e-49 199.5 199 55.8
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 4.4e-49 199.1 225 49.3
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 7.5e-49 198.4 199 54.8
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 3.7e-48 196.1 227 49.3
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 1.6e-46 190.7 227 50.2
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 4.5e-46 189.1 247 43.7
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 4.5e-46 189.1 244 47.1
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.9e-45 186.4 247 47.0
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 6.5e-45 185.3 255 47.8
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.5e-44 184.1 233 45.5
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 1.9e-44 183.7 267 46.8
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 2.5e-44 183.3 232 43.5
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 2.5e-44 183.3 231 45.5
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.2e-44 183.0 232 43.5
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 5.5e-44 182.2 233 49.4
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 1.6e-43 180.6 233 43.8
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 1.6e-43 180.6 233 43.8
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.6e-43 180.6 233 48.9
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 1.6e-43 180.6 245 44.9
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.0e-42 177.9 241 46.9
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.8e-42 177.2 233 44.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.3e-42 176.8 234 41.9
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 2.3e-42 176.8 155 64.5
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.0e-42 176.4 231 43.7
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 4.0e-42 176.0 233 48.5
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 6.8e-42 175.3 235 45.1
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.7e-40 170.6 238 46.2
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 2.0e-38 163.7 186 50.0
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 1.1e-36 157.9 252 42.5
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.5e-33 147.5 197 46.7
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 4.4e-33 146.0 202 47.5
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 2.4e-31 140.2 180 47.2
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.1e-31 139.4 204 39.7
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 2.7e-30 136.7 183 50.3
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 4.6e-30 136.0 189 43.4
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 1.0e-29 134.8 120 60.0
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 3.3e-28 129.8 228 35.1
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 3.0e-21 106.7 109 51.4
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.5e-20 103.6 210 32.4
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 4.0e-18 96.3 98 55.1
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 7.5e-17 92.0 191 30.9
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 3.2e-15 86.7 148 43.2
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 9.2e-15 85.1 208 27.4
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.1e-14 84.0 208 26.9
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 2.7e-14 83.6 158 31.6
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.7e-13 80.9 163 31.3
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 6.6e-13 79.0 64 67.2
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.5e-12 77.0 64 67.2
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 2.1e-11 73.9 113 32.7
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 6.8e-10 68.9 134 31.3
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 5.8e-09 65.9 88 42.0
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.5e-06 56.6 52 59.6


User provided reference genes

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