Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1927 Cannabis sativa HOM05D000264 ORTHO05D000152 8.7e-201 703.7 443 100.0
CANSAT78G2268 Cannabis sativa HOM05D000264 ORTHO05D000152 2.9e-95 353.2 430 62.1
CANSAT78G2137 Cannabis sativa HOM05D000264 ORTHO05D000152 4.7e-37 159.8 350 47.4
CANSAT78G0525 Cannabis sativa HOM05D000264 ORTHO05D000152 1.0e-36 158.7 392 45.2
CANSAT78G1322 Cannabis sativa HOM05D000264 ORTHO05D000152 6.5e-31 139.4 295 47.5
CANSAT78G1086 Cannabis sativa HOM05D000264 ORTHO05D000152 7.0e-25 119.4 359 34.5
CANSAT54G1172 Cannabis sativa HOM05D000264 ORTHO05D000152 3.3e-22 110.5 379 30.1
QL03p028282 Quercus lobata HOM05D000264 ORTHO05D000152 2.8e-21 107.5 340 44.4
QL03p028264 Quercus lobata HOM05D015411 ORTHO05D000152 4.0e-20 103.6 300 46.3
ClCG02G016840 Citrullus lanatus HOM05D000264 ORTHO05D000152 3.7e-18 97.1 374 25.7
QL03p028184 Quercus lobata HOM05D000264 ORTHO05D000152 4.9e-18 96.7 194 58.2
QL02p020235 Quercus lobata HOM05D000264 ORTHO05D000152 1.8e-17 94.7 340 34.1
QL03p028310 Quercus lobata HOM05D000264 ORTHO05D000152 1.0e-15 89.0 281 44.8
QL02p099732 Quercus lobata HOM05D000264 ORTHO05D000152 6.6e-15 86.3 248 29.0
MELO3C004399.2 Cucumis melo HOM05D000264 ORTHO05D000152 5.6e-14 83.2 275 28.0
CANSAT78G2263 Cannabis sativa HOM05D000264 ORTHO05D000152 1.2e-13 82.0 206 50.5
CsaV3_2G003930 Cucumis sativus L. HOM05D000264 ORTHO05D000152 2.1e-13 81.3 264 28.0
Eucgr.L01586 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.1e-13 81.3 357 36.7
QL03p027870 Quercus lobata HOM05D000264 ORTHO05D000152 2.1e-13 81.3 149 34.2
Eucgr.D01235 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.2e-13 79.7 330 39.4
ClCG02G016850 Citrullus lanatus HOM05D000264 ORTHO05D000152 1.0e-12 79.0 277 26.7
Eucgr.D01267 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.4e-12 78.6 347 26.8
MELO3C004404.2 Cucumis melo HOM05D000264 ORTHO05D000152 6.8e-12 76.3 333 36.3
Eucgr.D01523 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.8e-12 76.3 347 40.1
QL02p020291 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-11 75.5 173 47.4
CsaV3_2G003910 Cucumis sativus L. HOM05D000264 ORTHO05D000152 1.5e-11 75.1 238 27.3
Eucgr.D01232 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.4e-11 73.9 373 23.1
CiPaw.07G053800 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.4e-11 73.6 355 26.8
Manes.12G005300 Manihot esculenta HOM05D000264 ORTHO05D000152 5.8e-11 73.2 163 58.9
COL.COLO4_15399 Corchorus olitorius HOM05D000264 ORTHO05D000152 9.8e-11 72.4 358 27.7
Dinv44628 Davidia involucrata HOM05D000264 ORTHO05D000152 2.2e-10 71.2 357 24.4
Eucgr.D01248 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.7e-10 70.5 302 42.1
Sed0022421 Sechium edule HOM05D000264 ORTHO05D000152 4.9e-10 70.1 241 29.5
CiPaw.07G053700 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.1e-09 68.9 417 26.9
Eucgr.D01270 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.1e-09 68.9 349 24.6
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-09 68.6 354 23.4
Eucgr.D01276 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.4e-09 67.8 283 25.1
Eucgr.D01234 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.2e-09 67.4 332 37.7
Eucgr.H02695 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.2e-09 67.4 352 38.1
BcaB04g19313 Brassica carinata HOM05D000264 ORTHO05D000152 4.1e-09 67.0 334 23.4
Eucgr.D01524 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.1e-09 67.0 191 49.7
PGR142G1673 Punica granatum HOM05D000264 ORTHO05D000152 5.4e-09 66.6 357 35.9
RcHm_v2.0_Chr2g0097241 Rosa chinensis HOM05D000264 ORTHO05D000152 9.2e-09 65.9 357 24.4
Eucgr.D01257 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-08 65.1 163 58.9
Prupe.4G145300 Prunus persica HOM05D000264 ORTHO05D000152 1.6e-08 65.1 336 36.3
QL03p027978 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-08 65.1 147 56.5
Dinv09002 Davidia involucrata HOM05D000264 ORTHO05D000152 2.0e-08 64.7 353 34.3
Eucgr.H02697 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.7e-08 64.3 331 30.8
Sed0020174 Sechium edule HOM05D000264 ORTHO05D000152 2.7e-08 64.3 350 39.4
Eucgr.I00529 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.0e-08 63.2 314 36.9
Thecc.10G061700 Theobroma cacao HOM05D000264 ORTHO05D000152 7.8e-08 62.8 331 24.5
MELO3C004401.2 Cucumis melo HOM05D000264 ORTHO05D000152 1.0e-07 62.4 58 50.0
GSVIVG01036249001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.0e-07 62.4 343 36.7
BcaC09g49234 Brassica carinata HOM05D000264 ORTHO05D000152 2.3e-07 61.2 340 20.6
THA.LOC104803112 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 2.3e-07 61.2 343 34.4
BolC3t16381H Brassica oleracea HOM05D000264 ORTHO05D000152 3.0e-07 60.8 331 22.4
CSS0049013 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.0e-07 60.1 171 52.0
COL.COLO4_15396 Corchorus olitorius HOM05D000264 ORTHO05D000152 5.0e-07 60.1 348 25.3
BcaC01g04362 Brassica carinata HOM05D000264 ORTHO05D000152 1.5e-06 58.5 334 21.9
A03p33710 Brassica napus HOM05D000264 ORTHO05D000152 1.9e-06 58.2 342 22.2
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 1.9e-06 58.2 334 21.9
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 1.9e-06 58.2 342 21.9
Ciclev10004698m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.9e-06 58.2 344 22.4
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 1.9e-06 58.2 350 24.0
BolC1t05734H Brassica oleracea HOM05D000264 ORTHO05D000152 2.5e-06 57.8 352 27.3
COL.COLO4_15400 Corchorus olitorius HOM05D000264 ORTHO05D000152 2.5e-06 57.8 221 29.4
Eucgr.E02498 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.5e-06 57.8 158 26.6
Potri.018G077766 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.5e-06 57.8 199 28.6
BcaB04g21356 Brassica carinata HOM05D000264 ORTHO05D000152 3.3e-06 57.4 345 22.9
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.3e-06 57.4 354 23.7
CANSAT11G0583 Cannabis sativa HOM05D000264 ORTHO05D000152 3.3e-06 57.4 345 23.8
COL.COLO4_15393 Corchorus olitorius HOM05D000264 ORTHO05D000152 3.3e-06 57.4 229 27.5
AL3G14640 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 4.3e-06 57.0 337 22.3
C03p40960 Brassica napus HOM05D000264 ORTHO05D000152 4.3e-06 57.0 334 21.9
Duzib177G0309 Durio zibethinus HOM05D000264 ORTHO05D000152 4.3e-06 57.0 353 24.6
FAN19G1494 Fragaria x ananassa HOM05D000264 ORTHO05D000152 4.3e-06 57.0 344 35.8
Eucgr.D01258 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.6e-06 56.6 275 38.9
Gohir.D08G233800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 5.6e-06 56.6 227 31.3
Gorai.004G248400 Gossypium raimondii HOM05D000264 ORTHO05D000152 5.6e-06 56.6 227 31.3
QL02p075547 Quercus lobata HOM05D000264 ORTHO05D000152 5.6e-06 56.6 183 26.8
QL10p054384 Quercus lobata HOM05D000264 ORTHO05D000152 5.6e-06 56.6 370 33.0
THA.LOC104802840 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 5.6e-06 56.6 385 26.2
GSVIVG01001636001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.6e-06 56.6 338 30.2
BcaB04g21355 Brassica carinata HOM05D000264 ORTHO05D000152 7.3e-06 56.2 364 20.9
Eucgr.L01065 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.3e-06 56.2 164 53.0
Prupe.7G182500 Prunus persica HOM05D000264 ORTHO05D000152 7.3e-06 56.2 372 23.4
Thecc.05G278100 Theobroma cacao HOM05D000264 ORTHO05D000152 7.3e-06 56.2 357 24.4
TAR161G0003 Trochodendron aralioides HOM05D000264 ORTHO05D000152 7.3e-06 56.2 150 58.0
CARHR078810 Cardamine hirsuta HOM05D000264 ORTHO05D000152 9.5e-06 55.8 336 37.8


User provided reference genes

Program Settings