Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 2.1e-98 362.8 251 100.0
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 4.4e-40 169.1 253 65.2
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 7.2e-35 151.8 257 59.9
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 7.2e-35 151.8 251 61.0
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 1.2e-34 151.0 251 61.0
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 1.2e-34 151.0 251 61.4
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 2.3e-33 146.7 257 59.9
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 5.2e-33 145.6 251 60.2
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 8.8e-33 144.8 241 66.4
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 2.0e-32 143.7 257 59.5
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 7.5e-32 141.7 253 60.5
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.3e-31 141.0 253 61.3
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 1.0e-28 131.3 236 64.0
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 3.4e-24 116.3 248 56.5
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 7.5e-24 115.2 241 57.7
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 9.8e-24 114.8 245 55.9
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.3e-23 114.4 249 54.2
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.4e-22 110.2 268 53.0
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 3.1e-22 109.8 247 54.7
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 5.4e-22 109.0 253 53.8
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 1.2e-21 107.8 220 58.6
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 1.6e-21 107.5 248 55.6
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 2.7e-21 106.7 247 55.1
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.0e-20 104.8 240 54.6
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 2.9e-20 103.2 253 52.6
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 1.1e-19 101.3 247 54.7
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 4.7e-18 95.9 252 50.0
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 8.0e-18 95.1 254 50.4
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.2e-16 91.3 259 49.8
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 3.4e-16 89.7 249 55.4
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 3.4e-16 89.7 254 46.1
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 3.4e-16 89.7 246 55.7
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 9.8e-16 88.2 249 51.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.9e-15 86.7 233 57.5
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 4.9e-15 85.9 253 52.2
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.9e-15 85.9 254 52.8
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 8.3e-15 85.1 246 54.9
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 2.4e-14 83.6 252 52.0
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 7.0e-14 82.0 234 53.0
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 7.0e-14 82.0 282 43.6
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 2.7e-13 80.1 252 50.4
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 5.9e-13 79.0 229 54.1
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 7.8e-13 78.6 88 52.3
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.0e-12 78.2 225 45.8
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 3.0e-12 76.6 88 51.1
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 3.0e-12 76.6 227 54.6
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 5.0e-12 75.9 255 52.5
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 8.6e-12 75.1 231 54.5
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 4.3e-11 72.8 253 51.4
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 4.3e-11 72.8 253 51.4
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.3e-11 72.8 187 62.0
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 4.3e-11 72.8 203 54.2
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 1.2e-10 71.2 191 59.7
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 2.8e-10 70.1 250 54.0
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 1.0e-09 68.2 248 50.8
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 2.3e-09 67.0 261 35.6
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 2.3e-09 67.0 252 51.2
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 2.3e-09 67.0 256 49.2
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.1e-09 66.6 254 50.0
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 8.9e-09 65.1 87 50.6
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 8.9e-09 65.1 252 48.0
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 8.9e-09 65.1 200 58.5
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 8.9e-09 65.1 87 47.1
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 8.9e-09 65.1 87 47.1
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 1.2e-08 64.7 216 54.6
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 2.0e-08 63.9 255 38.4
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 2.6e-08 63.5 89 44.9
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 5.8e-08 62.4 89 43.8
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 7.5e-08 62.0 239 50.6
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 7.5e-08 62.0 252 50.4
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 9.8e-08 61.6 229 53.7
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.3e-07 61.2 87 50.6
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 1.3e-07 61.2 232 50.9
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.7e-07 60.8 202 56.9
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 2.2e-07 60.5 210 44.3
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 3.7e-07 59.7 246 48.0
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 4.9e-07 59.3 87 46.0
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 8.3e-07 58.5 245 45.7
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 8.3e-07 58.5 245 44.1
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 1.1e-06 58.2 77 46.8
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.4e-06 55.8 263 36.9
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 9.2e-06 55.1 72 48.6
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 9.2e-06 55.1 180 63.3
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 9.2e-06 55.1 254 33.9


User provided reference genes

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