Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 2.7e-66 255.4 145 100.0
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.2e-42 176.8 125 78.4
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 4.3e-16 88.6 38 89.5
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 5.7e-16 88.2 39 84.6
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 5.7e-16 88.2 39 84.6
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 3.7e-15 85.5 38 86.8
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 4.8e-15 85.1 41 82.9
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 6.3e-15 84.7 115 41.7
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 6.3e-15 84.7 36 91.7
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.1e-14 84.0 40 85.0
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.8e-14 83.2 40 82.5
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.4e-14 82.8 128 39.1
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.4e-14 82.8 38 81.6
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.4e-14 82.8 43 81.4
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.4e-14 82.8 43 81.4
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.4e-14 82.8 43 81.4
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.1e-14 82.4 39 82.1
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 3.1e-14 82.4 39 82.1
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 3.1e-14 82.4 36 91.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 3.1e-14 82.4 80 51.2
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 4.1e-14 82.0 37 78.4
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 4.1e-14 82.0 42 81.0
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.3e-14 81.6 43 79.1
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 5.3e-14 81.6 40 80.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 5.3e-14 81.6 35 85.7
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 6.9e-14 81.3 40 80.0
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 6.9e-14 81.3 39 82.1
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 6.9e-14 81.3 39 82.1
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 6.9e-14 81.3 39 82.1
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 6.9e-14 81.3 39 82.1
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 6.9e-14 81.3 37 86.5
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 9.0e-14 80.9 34 91.2
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.2e-13 80.5 119 51.3
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.2e-13 80.5 36 86.1
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.5e-13 80.1 40 77.5
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.5e-13 80.1 38 81.6
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.5e-13 80.1 37 83.8
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.5e-13 80.1 37 81.1
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.5e-13 80.1 35 85.7
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 2.0e-13 79.7 37 83.8
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 2.0e-13 79.7 32 96.9
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.0e-13 79.7 32 96.9
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 2.6e-13 79.3 32 93.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 3.4e-13 79.0 34 88.2
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.4e-13 79.0 41 78.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 4.5e-13 78.6 45 75.6
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 5.9e-13 78.2 33 90.9
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 5.9e-13 78.2 40 77.5
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 7.7e-13 77.8 38 78.9
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 7.7e-13 77.8 36 83.3
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 7.7e-13 77.8 108 44.4
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.0e-12 77.4 41 75.6
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.3e-12 77.0 37 81.1
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.3e-12 77.0 37 81.1
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.7e-12 76.6 32 90.6
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.7e-12 76.6 35 82.9
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.7e-12 76.6 35 82.9
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.2e-12 76.3 44 70.5
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 2.2e-12 76.3 38 76.3
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 2.2e-12 76.3 31 93.5
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.9e-12 75.9 99 43.4
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.9e-12 75.9 32 87.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 5.0e-12 75.1 34 82.4
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 6.5e-12 74.7 41 78.0
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 6.5e-12 74.7 41 78.0
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 6.5e-12 74.7 41 78.0
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 6.5e-12 74.7 31 90.3
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 8.5e-12 74.3 44 68.2
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 8.5e-12 74.3 32 87.5
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.4e-11 73.6 32 87.5
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.4e-11 73.6 32 87.5
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.4e-11 73.6 40 75.0
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.5e-11 72.8 40 75.0
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 2.5e-11 72.8 35 77.1
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 2.5e-11 72.8 30 90.0
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.5e-11 72.8 38 71.1
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.5e-11 72.8 103 40.8
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 3.2e-11 72.4 34 82.4
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 3.2e-11 72.4 29 93.1
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 4.2e-11 72.0 37 73.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 7.2e-11 71.2 32 81.2
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 9.4e-11 70.9 31 87.1
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 9.4e-11 70.9 31 87.1
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 9.4e-11 70.9 31 87.1
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 9.4e-11 70.9 39 69.2
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 9.4e-11 70.9 31 83.9
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.6e-10 68.9 32 78.1
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 4.6e-10 68.6 34 76.5
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.1e-10 68.2 34 73.5
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 7.9e-10 67.8 30 83.3
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.0e-09 67.4 30 83.3
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.0e-09 67.4 32 75.0
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 1.4e-09 67.0 37 67.6
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.4e-09 67.0 29 86.2
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.8e-09 66.6 33 78.8
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.3e-09 66.2 32 75.0
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-09 65.5 31 77.4
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-09 65.5 31 77.4
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-09 65.5 31 77.4
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.7e-09 64.7 34 73.5
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.1e-08 63.9 89 42.7
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.5e-08 63.5 31 71.0
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 9.7e-08 60.8 29 79.3
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 5.3e-06 55.1 68 42.6


User provided reference genes

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