Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 1.3e-30 136.3 106 100.0
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 1.8e-27 125.9 106 92.5
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 4.0e-11 71.6 112 43.8
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 5.2e-11 71.2 112 42.9
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.5e-10 69.7 112 42.0
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 1.1e-08 63.5 110 62.7
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-08 63.2 98 40.8
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 2.4e-08 62.4 101 59.4
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 4.1e-08 61.6 98 40.8
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.4e-08 61.2 110 39.1
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 1.2e-07 60.1 40 72.5
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.1e-07 59.3 110 39.1
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.7e-07 58.9 107 38.3
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 3.5e-07 58.5 42 61.9
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 6.0e-07 57.8 110 37.3
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 6.0e-07 57.8 101 59.4
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 6.0e-07 57.8 101 41.6
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 6.0e-07 57.8 87 44.8
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 7.8e-07 57.4 110 38.2
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 7.8e-07 57.4 93 62.4
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 7.8e-07 57.4 42 61.9
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 107 40.2
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.0e-06 57.0 109 36.7
HPP92_007287 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.0e-06 57.0 41 65.9
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.3e-06 56.6 109 37.6
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 1.7e-06 56.2 101 41.6
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 5.1e-06 54.7 107 39.3
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 5.1e-06 54.7 42 57.1
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 5.1e-06 54.7 110 38.2
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 5.1e-06 54.7 43 55.8
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 6.6e-06 54.3 38 68.4
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 6.6e-06 54.3 112 34.8
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 8.6e-06 53.9 41 61.0
Medtr1g045950 Medicago truncatula HOM05D005842 ORTHO05D007077 8.6e-06 53.9 37 67.6
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 8.6e-06 53.9 98 39.8
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 8.6e-06 53.9 40 67.5
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 8.6e-06 53.9 41 58.5
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 8.6e-06 53.9 101 33.7


User provided reference genes

Program Settings