Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 4.6e-208 727.6 366 100.0
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 2.2e-125 453.0 380 65.5
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 4.2e-124 448.7 312 73.7
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 7.1e-124 448.0 372 62.1
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 1.0e-122 444.1 378 62.2
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 9.6e-121 437.6 376 64.6
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 4.8e-120 435.3 375 61.1
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 3.1e-119 432.6 373 61.4
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 3.4e-118 429.1 371 61.5
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 3.4e-118 429.1 377 61.8
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 4.5e-118 428.7 369 61.8
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 7.6e-118 427.9 373 61.4
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 2.2e-117 426.4 375 61.9
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 3.8e-117 425.6 300 70.3
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 6.4e-117 424.9 368 62.5
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 1.1e-116 424.1 329 66.6
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 1.1e-116 424.1 369 62.3
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 1.2e-115 420.6 379 60.4
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 8.7e-114 414.5 316 66.5
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 4.3e-113 412.1 368 59.0
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 9.6e-113 411.0 369 60.4
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 3.7e-112 409.1 372 61.0
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 4.8e-112 408.7 372 59.9
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 8.1e-112 407.9 376 59.3
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 8.1e-112 407.9 371 59.6
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 1.1e-111 407.5 373 58.2
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 1.4e-111 407.1 338 64.2
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 1.4e-111 407.1 385 59.5
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 1.8e-111 406.8 371 59.3
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 2.4e-111 406.4 373 58.2
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 5.3e-111 405.2 362 61.3
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 5.3e-111 405.2 383 59.0
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 9.0e-111 404.4 374 57.0
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 2.0e-110 403.3 316 66.8
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 2.6e-110 402.9 365 57.3
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 5.8e-110 401.7 353 60.1
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 5.8e-110 401.7 368 57.9
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 5.8e-110 401.7 346 59.0
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 7.6e-110 401.4 302 66.2
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 1.0e-109 401.0 366 57.7
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 1.3e-109 400.6 393 57.5
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 2.2e-109 399.8 416 55.3
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 2.9e-109 399.4 291 68.4
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 2.9e-109 399.4 368 61.1
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 3.8e-109 399.1 345 61.7
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 1.9e-108 396.7 340 60.9
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 1.9e-108 396.7 340 60.6
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 1.9e-108 396.7 335 61.8
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 4.2e-108 395.6 303 64.0
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 9.3e-108 394.4 369 55.3
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 9.3e-108 394.4 347 57.6
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 2.1e-107 393.3 378 58.7
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 4.6e-107 392.1 366 56.6
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 6.0e-107 391.7 365 57.5
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 1.8e-106 390.2 295 65.4
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 5.1e-106 388.7 371 58.5
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 6.7e-106 388.3 305 62.0
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 1.1e-105 387.5 298 66.4
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 1.5e-105 387.1 366 56.8
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 1.9e-105 386.7 367 56.9
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 5.7e-105 385.2 363 58.7
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 5.7e-105 385.2 297 64.6
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 7.4e-105 384.8 353 56.9
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 2.8e-104 382.9 372 54.8
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 2.8e-104 382.9 372 56.7
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 1.4e-103 380.6 376 54.8
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 1.4e-103 380.6 275 66.9
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 1.8e-103 380.2 369 56.4
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 5.3e-103 378.6 303 63.0
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 3.4e-102 375.9 374 54.8
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 4.5e-102 375.6 371 55.8
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 5.9e-102 375.2 303 62.4
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 5.9e-102 375.2 350 56.3
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 1.0e-101 374.4 371 55.3
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 1.0e-101 374.4 279 65.6
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 1.7e-101 373.6 334 58.4
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 2.2e-101 373.2 282 65.6
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 2.9e-101 372.9 270 68.1
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 1.4e-100 370.5 296 63.2
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 1.9e-100 370.2 371 55.0
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 1.9e-100 370.2 371 55.0
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 5.5e-100 368.6 307 60.6
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 9.3e-100 367.9 470 47.0
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 1.6e-99 367.1 309 61.5
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 2.1e-99 366.7 291 64.6
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 2.7e-99 366.3 313 60.4
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 3.6e-99 365.9 241 75.1
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 1.0e-98 364.4 359 54.9
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 1.0e-98 364.4 365 55.9
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 1.8e-98 363.6 297 62.0
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.0e-98 362.8 367 54.2
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 8.7e-98 361.3 297 62.6
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 1.1e-97 360.9 280 64.6
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 1.9e-97 360.1 347 57.3
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 1.9e-97 360.1 272 64.3
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 2.8e-96 356.3 349 57.0
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 6.9e-95 351.7 279 61.3
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 1.2e-94 350.9 317 59.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 4.5e-94 349.0 318 57.2
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 5.0e-93 345.5 247 70.0
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 5.0e-93 345.5 296 60.1
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 1.2e-91 340.9 227 72.7
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 3.6e-91 339.3 306 58.5
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 1.4e-90 337.4 273 62.3
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 2.3e-90 336.7 414 47.3
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 5.7e-89 332.0 275 60.0
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 2.4e-87 326.6 375 47.2
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 1.2e-86 324.3 300 58.0
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 4.5e-86 322.4 274 59.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.1e-84 317.8 323 52.9
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 7.4e-81 305.1 255 61.2
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 5.7e-73 278.9 234 59.4
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 1.7e-72 277.3 186 73.1
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 2.7e-70 270.0 232 55.6
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 1.3e-69 267.7 231 58.4
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 3.2e-68 263.1 271 49.8
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 1.7e-64 250.8 301 49.2
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 5.0e-61 239.2 190 61.1
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 1.4e-58 231.1 260 45.8
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 3.4e-49 199.9 138 71.7
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 6.6e-45 185.7 203 50.7
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 6.8e-42 175.6 187 50.3
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 2.0e-33 147.5 143 56.6
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 3.8e-24 116.7 342 28.9
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 2.3e-21 107.5 82 70.7
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 1.9e-20 104.4 132 49.2
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 3.3e-12 77.0 47 76.6
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 3.3e-12 77.0 79 50.6
SEGI_34336 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 6.0e-06 56.2 33 78.8


User provided reference genes

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