Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 3.1e-121 438.7 262 100.0
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 8.5e-71 271.2 265 61.5
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 2.5e-70 269.6 265 61.1
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 2.3e-68 263.1 246 61.4
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 3.0e-68 262.7 272 64.7
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.2e-67 260.8 272 58.1
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 9.7e-67 257.7 272 59.6
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 1.7e-66 256.9 250 59.6
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 6.3e-66 255.0 232 61.2
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 1.8e-65 253.4 248 59.3
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.8e-65 253.4 267 58.4
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 2.4e-65 253.1 230 64.8
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.1e-65 252.7 228 64.0
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 4.1e-65 252.3 223 64.6
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 5.3e-65 251.9 231 63.6
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 9.1e-65 251.1 229 64.6
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 9.1e-65 251.1 240 61.7
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 1.2e-64 250.8 229 64.6
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 1.2e-64 250.8 245 59.2
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.0e-64 250.0 243 62.1
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 1.0e-63 247.7 269 64.7
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.7e-63 246.9 221 67.0
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 5.0e-63 245.4 262 61.8
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 5.0e-63 245.4 260 56.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.5e-62 243.8 222 68.0
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 3.2e-62 242.7 265 60.4
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 4.2e-62 242.3 250 60.4
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 9.4e-62 241.1 221 62.4
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 9.4e-62 241.1 254 56.7
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 1.2e-61 240.7 221 61.1
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 2.1e-61 240.0 266 55.6
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 2.7e-61 239.6 220 60.9
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 2.7e-61 239.6 237 58.2
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 8.0e-61 238.0 212 66.5
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 1.4e-60 237.3 231 61.9
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 4.0e-60 235.7 232 59.9
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.8e-60 235.0 260 54.2
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 1.5e-59 233.8 241 58.9
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 2.6e-59 233.0 222 60.8
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.6e-59 233.0 231 60.6
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.4e-59 232.6 262 54.6
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 3.4e-59 232.6 246 56.9
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 4.4e-59 232.3 251 55.8
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 4.4e-59 232.3 251 55.8
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 5.7e-59 231.9 252 66.7
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 5.7e-59 231.9 251 55.8
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.3e-58 230.7 251 65.3
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.2e-58 229.9 229 58.5
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 2.8e-58 229.6 257 56.0
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 4.8e-58 228.8 242 55.8
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 4.8e-58 228.8 260 53.1
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 8.3e-58 228.0 237 56.5
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 8.3e-58 228.0 270 55.6
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 1.4e-57 227.3 253 55.3
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 2.4e-57 226.5 222 59.9
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 7.0e-57 224.9 269 52.8
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.2e-56 224.2 248 64.1
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.0e-56 223.4 280 53.2
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 3.5e-56 222.6 258 53.1
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 3.5e-56 222.6 243 57.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 3.5e-56 222.6 222 59.9
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 4.5e-56 222.2 216 65.7
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 4.5e-56 222.2 220 59.5
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 4.5e-56 222.2 266 60.9
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 2.3e-55 219.9 222 59.9
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.9e-55 219.5 247 54.7
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.9e-55 219.5 251 60.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 5.0e-55 218.8 248 56.5
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 5.0e-55 218.8 231 57.1
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 8.6e-55 218.0 183 68.9
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.5e-54 217.2 221 58.8
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 3.3e-54 216.1 221 58.8
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 7.2e-54 214.9 238 55.0
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 9.5e-54 214.5 248 53.2
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 1.2e-53 214.2 246 62.2
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 4.7e-53 212.2 248 52.8
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 6.1e-53 211.8 243 53.5
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.0e-52 211.1 233 54.1
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 1.8e-52 210.3 330 43.9
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.8e-52 210.3 223 54.7
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 4.0e-52 209.1 223 55.6
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 5.2e-52 208.8 221 54.3
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 6.8e-52 208.4 254 51.6
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.3e-50 204.1 239 61.1
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 1.7e-50 203.8 225 54.7
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 4.9e-50 202.2 213 56.3
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 8.3e-50 201.4 253 53.0
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 8.3e-50 201.4 250 50.8
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 1.8e-49 200.3 238 50.8
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 7.0e-49 198.4 222 52.3
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.2e-48 197.6 240 50.0
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 3.5e-48 196.1 137 76.6
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 5.9e-48 195.3 244 49.2
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.7e-47 193.7 230 50.0
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 3.9e-47 192.6 249 49.4
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 5.0e-47 192.2 228 62.7
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 8.6e-47 191.4 239 48.1
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.1e-46 191.0 245 49.8
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 1.9e-46 190.3 244 49.6
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 1.9e-46 190.3 244 49.6
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 3.3e-46 189.5 227 50.7
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 4.3e-46 189.1 239 53.6
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 7.3e-46 188.3 226 50.9
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 3.6e-45 186.0 230 49.6
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 3.6e-45 186.0 230 49.6
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 6.1e-45 185.3 245 49.0
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.8e-44 183.7 245 48.6
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.2e-43 181.0 122 77.9
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 4.4e-43 179.1 251 46.2
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.2e-41 172.9 221 49.8
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.0e-40 170.2 221 49.3
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 7.5e-35 151.8 242 41.3
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 2.2e-34 150.2 122 70.5
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.8e-29 133.3 271 37.3
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.8e-24 115.2 126 56.3
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.3e-23 114.4 163 46.6
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 3.0e-23 113.2 258 34.1
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 5.1e-23 112.5 127 48.0
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.9e-22 110.5 130 53.1
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.6e-21 107.5 96 62.5
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 2.1e-21 107.1 119 50.4
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 8.1e-13 78.6 121 39.7
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.5e-11 74.3 194 36.6
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 7.1e-09 65.5 121 36.4
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 3.5e-08 63.2 54 64.8


User provided reference genes

Program Settings