Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1657 Cannabis sativa HOM05D012483 ORTHO05D000352 2.8e-174 615.1 303 100.0
CANSAT35G1177 Cannabis sativa HOM05D012483 ORTHO05D000352 1.5e-71 273.9 297 51.9
CANSAT54G2130 Cannabis sativa HOM05D012483 ORTHO05D000352 5.4e-69 265.4 297 50.8
CANSAT80G0247 Cannabis sativa HOM05D012483 ORTHO05D000352 2.3e-67 260.0 329 47.4
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 7.3e-58 228.4 305 46.6
CANSAT35G0915 Cannabis sativa HOM05D012483 ORTHO05D000352 9.6e-58 228.0 280 48.6
CANSAT21G0361 Cannabis sativa HOM05D012483 ORTHO05D000352 4.2e-45 186.0 265 43.8
CANSAT11G0771 Cannabis sativa HOM05D012483 ORTHO05D000352 1.0e-35 154.8 345 35.7
CANSAT80G0215 Cannabis sativa HOM05D008422 ORTHO05D000352 5.1e-35 152.5 119 60.5
CANSAT54G0136 Cannabis sativa HOM05D000429 ORTHO05D000352 1.5e-34 151.0 131 58.0
CANSAT25G1487 Cannabis sativa HOM05D000429 ORTHO05D000352 1.9e-34 150.6 96 67.7
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 6.2e-33 145.6 247 39.7
CANSAT21G0172 Cannabis sativa HOM05D012483 ORTHO05D000352 6.9e-32 142.1 86 74.4
CANSAT71G0010 Cannabis sativa HOM05D012483 ORTHO05D000880 9.0e-32 141.7 261 38.3
CANSAT54G0532 Cannabis sativa HOM05D000429 ORTHO05D000352 2.6e-31 140.2 102 62.7
CANSAT56G0538 Cannabis sativa HOM05D012483 ORTHO05D000352 1.7e-30 137.5 312 34.0
CANSAT80G1350 Cannabis sativa HOM05D000429 ORTHO05D000352 3.7e-25 119.8 74 71.6
CANSAT25G2129 Cannabis sativa HOM05D000429 ORTHO05D000352 5.9e-23 112.5 79 67.1
CANSAT35G0088 Cannabis sativa HOM05D012483 ORTHO05D000352 7.4e-18 95.5 196 34.2
CANSAT11G1703 Cannabis sativa HOM05D012483 ORTHO05D000352 4.8e-17 92.8 165 41.8
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-16 90.9 243 28.4
CANSAT80G0171 Cannabis sativa HOM05D012483 ORTHO05D000880 5.3e-16 89.4 57 70.2
CANSAT56G0555 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-15 86.7 110 40.0
CANSAT21G2110 Cannabis sativa HOM05D008422 ORTHO05D000352 4.5e-15 86.3 107 43.0
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 4.5e-15 86.3 83 47.0
CANSAT80G1559 Cannabis sativa HOM05D008422 ORTHO05D000352 1.0e-14 85.1 105 43.8
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 1.7e-14 84.3 110 40.9
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 2.9e-14 83.6 93 44.1
CANSAT78G0541 Cannabis sativa HOM05D019409 ORTHO05D000352 8.5e-14 82.0 110 39.1
CANSAT01G0535 Cannabis sativa HOM05D008422 ORTHO05D000352 1.1e-13 81.6 105 42.9
CANSAT80G2507 Cannabis sativa HOM05D008422 ORTHO05D000352 1.4e-13 81.3 228 26.8
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 2.5e-13 80.5 86 44.2
CANSAT54G0803 Cannabis sativa HOM05D008422 ORTHO05D000352 3.2e-13 80.1 96 43.8
CANSAT56G2499 Cannabis sativa HOM05D000429 ORTHO05D000352 4.2e-13 79.7 130 35.4
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 9.4e-13 78.6 110 37.3
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-12 78.2 113 37.2
CANSAT01G1361 Cannabis sativa HOM05D000429 ORTHO05D000352 1.6e-12 77.8 94 44.7
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 3.6e-12 76.6 105 38.1
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 4.7e-12 76.3 110 38.2
CANSAT01G1297 Cannabis sativa HOM05D000429 ORTHO05D000352 1.0e-11 75.1 79 41.8
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-11 74.7 80 46.2
CANSAT80G0282 Cannabis sativa HOM05D008422 ORTHO05D000352 1.8e-11 74.3 121 35.5
CANSAT54G2253 Cannabis sativa HOM05D008422 ORTHO05D000352 2.3e-11 73.9 130 33.8
CANSAT11G0201 Cannabis sativa HOM05D008422 ORTHO05D000352 3.9e-11 73.2 99 39.4
CANSAT21G0753 Cannabis sativa HOM05D008422 ORTHO05D000352 3.9e-11 73.2 86 40.7
CANSAT56G0797 Cannabis sativa HOM05D000429 ORTHO05D000352 3.9e-11 73.2 81 44.4
CANSAT80G0164 Cannabis sativa HOM05D008422 ORTHO05D000352 8.8e-11 72.0 133 34.6
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-10 71.6 118 36.4
CANSAT54G1906 Cannabis sativa HOM05D008422 ORTHO05D000352 1.5e-10 71.2 114 34.2
CANSAT35G1743 Cannabis sativa HOM05D008422 ORTHO05D000352 2.6e-10 70.5 101 38.6
CANSAT80G1044 Cannabis sativa HOM05D008422 ORTHO05D000352 2.6e-10 70.5 86 38.4
CANSAT11G0413 Cannabis sativa HOM05D008422 ORTHO05D000352 3.3e-10 70.1 86 38.4
CANSAT78G2509 Cannabis sativa HOM05D008422 ORTHO05D000352 7.4e-10 68.9 85 38.8
CANSAT80G1547 Cannabis sativa HOM05D008422 ORTHO05D000352 1.7e-09 67.8 80 38.8
CANSAT80G1023 Cannabis sativa HOM05D008422 ORTHO05D000352 2.8e-09 67.0 134 35.8
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 2.8e-09 67.0 325 23.7
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 3.7e-09 66.6 299 24.4
CANSAT78G0921 Cannabis sativa HOM05D012483 ORTHO05D000880 3.7e-09 66.6 37 78.4
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 4.8e-09 66.2 283 26.5
CANSAT50G0001 Cannabis sativa HOM05D008422 ORTHO05D000352 4.8e-09 66.2 119 32.8
CANSAT25G0953 Cannabis sativa HOM05D008422 ORTHO05D000352 6.3e-09 65.9 81 39.5
CANSAT80G0281 Cannabis sativa HOM05D008422 ORTHO05D000352 8.2e-09 65.5 86 37.2
CANSAT25G2247 Cannabis sativa HOM05D008422 ORTHO05D000352 1.1e-08 65.1 113 33.6
CANSAT25G2709 Cannabis sativa HOM05D009938 ORTHO05D000880 1.1e-08 65.1 283 25.4
CANSAT11G0966 Cannabis sativa HOM05D008422 ORTHO05D000352 3.1e-08 63.5 144 29.9
TWI75G0872 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.1e-08 63.5 294 22.8
CANSAT11G2256 Cannabis sativa HOM05D009938 ORTHO05D000352 4.1e-08 63.2 84 39.3
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 5.3e-08 62.8 315 23.2
CANSAT78G0676 Cannabis sativa HOM05D008422 ORTHO05D000352 5.3e-08 62.8 78 37.2
CANSAT35G0045 Cannabis sativa HOM05D008422 ORTHO05D000352 7.0e-08 62.4 83 36.1
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 9.1e-08 62.0 189 27.5
CANSAT25G0316 Cannabis sativa HOM05D009938 ORTHO05D000352 1.2e-07 61.6 107 35.5
CANSAT01G3249 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 60.8 55 50.9
CANSAT25G0239 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-07 60.1 60 46.7
CANSAT80G0151 Cannabis sativa HOM05D009938 ORTHO05D000880 4.5e-07 59.7 84 36.9
CANSAT21G1062 Cannabis sativa HOM05D000429 ORTHO05D000352 5.9e-07 59.3 97 34.0
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 7.7e-07 58.9 85 36.5
TWI39G1023 Tripterygium wilfordii HOM05D000429 ORTHO05D008058 7.7e-07 58.9 288 22.2
DCAR_031974 Daucus carota HOM05D000429 ORTHO05D000352 1.0e-06 58.5 337 20.5
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 1.3e-06 58.2 58 48.3
CANSAT54G0908 Cannabis sativa HOM05D009938 ORTHO05D000880 1.3e-06 58.2 251 25.1
CANSAT64G1863 Cannabis sativa HOM05D009938 ORTHO05D000880 1.7e-06 57.8 118 34.7
CANSAT21G1212 Cannabis sativa HOM05D008422 ORTHO05D000352 2.2e-06 57.4 87 36.8
arahy.Tifrunner.gnm1.ann1.6D2RJL Arachis hypogaea HOM05D000429 ORTHO05D000880 3.8e-06 56.6 98 32.7
CANSAT11G0378 Cannabis sativa HOM05D008422 ORTHO05D000352 5.0e-06 56.2 77 36.4
CANSAT54G2914 Cannabis sativa HOM05D008422 ORTHO05D000352 5.0e-06 56.2 46 52.2
CANSAT80G2076 Cannabis sativa HOM05D000429 ORTHO05D000352 6.5e-06 55.8 46 52.2
CANSAT01G0278 Cannabis sativa HOM05D001001 ORTHO05D000808 8.5e-06 55.5 75 41.3
CANSAT35G1126 Cannabis sativa HOM05D009938 ORTHO05D000352 8.5e-06 55.5 74 39.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 8.5e-06 55.5 318 22.6


User provided reference genes

Program Settings