Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1621 Cannabis sativa HOM05D007138 ORTHO05D009148 0.0e+00 1476.8 850 100.0
RcHm_v2.0_Chr4g0412661 Rosa chinensis HOM05D007138 ORTHO05D009148 1.6e-78 298.5 880 33.2
Haze_11677 Corylus avellana HOM05D007138 ORTHO05D009148 4.0e-77 293.9 702 36.8
MD04G1019900 Malus domestica HOM05D007138 ORTHO05D009148 1.7e-75 288.5 940 31.6
QL06p027005 Quercus lobata HOM05D007138 ORTHO05D009148 3.7e-75 287.3 713 34.6
FAN12G4162 Fragaria x ananassa HOM05D007138 ORTHO05D009148 4.9e-75 287.0 883 32.3
FvH4_4g12980 Fragaria vesca HOM05D007138 ORTHO05D009148 2.4e-74 284.6 886 31.9
Cfa008656 Carpinus fangiana HOM05D007138 ORTHO05D009148 3.5e-73 280.8 690 35.9
CiPaw.01G114100 Carya illinoinensis HOM05D007138 ORTHO05D009148 7.8e-73 279.6 709 34.4
Thecc.04G192200 Theobroma cacao HOM05D007138 ORTHO05D009148 2.9e-67 261.2 930 30.0
FAN07G0102 Fragaria x ananassa HOM05D007138 ORTHO05D009148 3.7e-67 260.8 651 34.4
Potri.002G236300 Populus trichocarpa HOM05D007138 ORTHO05D009148 1.4e-66 258.8 880 31.0
Gohir.A09G207700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 1.2e-65 255.8 910 30.0
Gorai.006G224900 Gossypium raimondii HOM05D007138 ORTHO05D009148 3.5e-65 254.2 907 30.3
Gohir.D09G201200 Gossypium hirsutum HOM05D007138 ORTHO05D009148 7.8e-65 253.1 906 30.2
Prupe.1G169400 Prunus persica HOM05D007138 ORTHO05D009148 3.9e-64 250.8 942 30.9
GSVIVG01031579001 Vitis vinifera HOM05D007138 ORTHO05D009148 1.3e-59 235.7 488 37.3
Sabra02G0180000 Salix brachista HOM05D007138 ORTHO05D009148 1.7e-59 235.3 708 33.2
Duzib151G0530 Durio zibethinus HOM05D007138 ORTHO05D009148 4.9e-59 233.8 919 28.3
TAR365G0398 Trochodendron aralioides HOM05D007138 ORTHO05D009148 1.3e-56 225.7 510 36.7
Dinv27178 Davidia involucrata HOM05D007138 ORTHO05D009148 1.7e-56 225.3 510 36.5
Gorai.005G025100 Gossypium raimondii HOM05D007138 ORTHO05D009148 1.2e-52 212.6 657 30.7
Manes.01G054400 Manihot esculenta HOM05D007138 ORTHO05D009148 2.0e-52 211.8 652 29.9
Gohir.A02G017700 Gossypium hirsutum HOM05D007138 ORTHO05D009148 2.6e-52 211.5 641 31.4
TWI53G1035 Tripterygium wilfordii HOM05D007138 ORTHO05D009148 4.4e-52 210.7 706 29.2
SalBow2G2858 Salvia bowleyana HOM05D007138 ORTHO05D009148 2.9e-51 208.0 651 32.0
Gohir.D02G019900 Gossypium hirsutum HOM05D007138 ORTHO05D009148 2.4e-50 204.9 651 30.7
SalBow2G0985 Salvia bowleyana HOM05D007138 ORTHO05D009148 6.0e-49 200.3 649 30.8
Eucgr.H02635 Eucalyptus grandis HOM05D007138 ORTHO05D009148 1.0e-48 199.5 672 29.6
Glyma.08G107400 Glycine max HOM05D007138 ORTHO05D009148 1.0e-48 199.5 705 30.5
Atru.chr3.1784 Acer truncatum HOM05D007138 ORTHO05D009148 1.7e-48 198.7 408 37.7
Nn1g08135 Nelumbo nucifera HOM05D007138 ORTHO05D009148 2.3e-48 198.4 542 33.9
Ciclev10004866m.g Citrus clementina HOM05D007138 ORTHO05D009148 3.0e-48 198.0 423 35.2
Glyma.05G150500 Glycine max HOM05D007138 ORTHO05D009148 5.6e-47 193.7 702 28.9
CsaV3_6G009270 Cucumis sativus L. HOM05D007138 ORTHO05D009148 7.3e-47 193.4 667 30.0
Aqoxy2G03906 Aquilegia oxysepala HOM05D007138 ORTHO05D009148 2.1e-46 191.8 829 28.5
ClCG06G003170 Citrullus lanatus HOM05D007138 ORTHO05D009148 1.8e-45 188.7 658 29.5
AUR62020894 Chenopodium quinoa HOM05D007138 ORTHO05D009148 9.9e-44 183.0 432 33.3
Hund25334 Selenicereus undatus HOM05D007138 ORTHO05D009148 1.7e-43 182.2 517 32.1
MSTRG.9782 Avicennia marina HOM05D007138 ORTHO05D009148 6.4e-43 180.3 866 27.7
EL10Ac3g07428 Beta vulgaris HOM05D007138 ORTHO05D009148 1.1e-42 179.5 448 34.6
Sc13g0000510 Simmondsia chinensis HOM05D007138 ORTHO05D009148 1.1e-42 179.5 450 33.3
Sed0014888 Sechium edule HOM05D007138 ORTHO05D009148 9.3e-42 176.4 667 29.2
Lalb_Chr13g0294671 Lupinus albus HOM05D007138 ORTHO05D009148 4.6e-41 174.1 732 28.8
arahy.Tifrunner.gnm1.ann1.KQUG48 Arachis hypogaea HOM05D007138 ORTHO05D009148 7.8e-41 173.3 719 28.9
AUR62018524 Chenopodium quinoa HOM05D007138 ORTHO05D009148 1.3e-40 172.6 431 32.7
arahy.Tifrunner.gnm1.ann1.JT7ZMS Arachis hypogaea HOM05D007138 ORTHO05D009148 3.0e-40 171.4 717 27.8
Cc03_g09210 Coffea canephora HOM05D007138 ORTHO05D009148 8.7e-40 169.9 677 29.0
Lalb_Chr12g0205841 Lupinus albus HOM05D007138 ORTHO05D009148 1.9e-39 168.7 447 34.2
Hma1.2p1_1457F.1_g284650 Hydrangea macrophylla HOM05D007138 ORTHO05D009148 2.5e-39 168.3 377 36.3
TPR.G11960 Trifolium pratense HOM05D000150 ORTHO05D000108 5.6e-39 167.2 385 35.8
PGR083G1257 Punica granatum HOM05D007138 ORTHO05D009148 7.3e-39 166.8 651 29.3
Cpa.g.sc157.22 Carica papaya HOM05D007138 ORTHO05D009148 9.6e-39 166.4 443 34.3
Psat0s4823g0040 Pisum sativum HOM05D007138 ORTHO05D009148 4.8e-38 164.1 374 35.8
ECA233G0560 Erigeron canadensis HOM05D007138 ORTHO05D009148 1.4e-37 162.5 598 29.4
Oeu034315.1 Olea europaea HOM05D007138 ORTHO05D009148 4.0e-37 161.0 673 28.7
Migut.G00946 Erythranthe guttata HOM05D007138 ORTHO05D009148 7.6e-36 156.8 421 31.8
Phvul.003G291400 Phaseolus vulgaris HOM05D007138 ORTHO05D009148 1.3e-35 156.0 674 28.9
CARHR099730 Cardamine hirsuta HOM05D007138 ORTHO05D009148 1.7e-35 155.6 434 30.4
Medtr8g083310 Medicago truncatula HOM05D007138 ORTHO05D009148 2.2e-35 155.2 708 27.3
Lsat_1_v5_gn_6_59601 Lactuca sativa HOM05D007138 ORTHO05D009148 1.9e-34 152.1 474 29.1
Peaxi162Scf00286g01047 Petunia axillaris HOM05D007138 ORTHO05D009148 1.9e-34 152.1 788 26.9
Ca_18004_v3 Cicer arietinum L. HOM05D007138 ORTHO05D009148 4.2e-34 151.0 198 47.0
Lj4g0024791 Lotus japonicus HOM05D007138 ORTHO05D009148 4.2e-34 151.0 627 28.7
MELO3C021153.2 Cucumis melo HOM05D007138 ORTHO05D009148 2.1e-33 148.7 163 50.3
PGSC0003DMG400021869 Solanum tuberosum HOM05D007138 ORTHO05D009148 2.1e-33 148.7 771 28.7
THA.LOC104804782 Tarenaya hassleriana HOM05D007138 ORTHO05D009148 3.5e-33 147.9 518 28.6
AL3G38640 Arabidopsis lyrata HOM05D007138 ORTHO05D009148 4.6e-33 147.5 353 33.1
VMungo0251G1281 Vigna mungo HOM05D007138 ORTHO05D009148 6.0e-33 147.1 214 45.8
Sopen09g035410 Solanum pennellii HOM05D007138 ORTHO05D009148 1.8e-32 145.6 941 26.0
A07p08650 Brassica napus HOM05D007138 ORTHO05D009148 3.0e-32 144.8 371 30.2
BraA07t28655Z Brassica rapa HOM05D007138 ORTHO05D009148 3.0e-32 144.8 371 30.2
AT3G23740 Arabidopsis thaliana HOM05D007138 ORTHO05D009148 5.1e-32 144.1 480 29.6
Nitab4.5_0000037g0170 Nicotiana tabacum HOM05D007138 ORTHO05D009148 6.7e-32 143.7 780 26.9
BcaC06g35563 Brassica carinata HOM05D007138 ORTHO05D009148 4.3e-31 141.0 373 30.8
BcaB06g26533 Brassica carinata HOM05D007138 ORTHO05D009148 1.3e-30 139.4 418 30.6
Solyc09g092510.3 Solanum lycopersicum HOM05D007138 ORTHO05D009148 1.3e-30 139.4 945 26.1
Sp3g21450 Schrenkiella parvula HOM05D007138 ORTHO05D009148 6.2e-30 137.1 468 29.3
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 3.1e-29 134.8 449 29.8
HanXRQChr02g0058451 Helianthus annuus HOM05D007138 ORTHO05D009148 3.1e-29 134.8 847 25.0
C07p13480 Brassica napus HOM05D007138 ORTHO05D009148 5.3e-29 134.0 373 30.6
BolC7t41843H Brassica oleracea HOM05D007138 ORTHO05D009148 5.3e-29 134.0 373 30.6
Carub.0003s2404 Capsella rubella HOM05D007138 ORTHO05D009148 6.9e-29 133.7 553 26.8
Thhalv10002448m.g Eutrema salsugineum HOM05D007138 ORTHO05D009148 1.2e-28 132.9 437 32.0
MBI11_g07400_MAGBIO Magnolia biondii HOM05D007138 ORTHO05D009148 2.6e-28 131.7 766 29.6
Aa31LG8G10280 Aethionema arabicum HOM05D007138 ORTHO05D009148 6.4e-27 127.1 197 44.2
Oeu056444.1 Olea europaea HOM05D007138 ORTHO05D009148 3.5e-25 121.3 449 28.3
unitig_747.g21666 Utricularia gibba HOM05D007138 ORTHO05D009148 3.0e-24 118.2 407 29.0
Zm00001eb334100 Zea mays HOM05D007138 ORTHO05D009148 5.6e-23 114.0 201 38.3
Os01g0101800 Oryza sativa ssp. japonica HOM05D007138 ORTHO05D009148 2.8e-22 111.7 221 35.7
Zm00001eb127090 Zea mays HOM05D007138 ORTHO05D009148 1.5e-20 105.9 117 44.4
Lsat_1_v5_gn_6_58941 Lactuca sativa HOM05D007138 ORTHO05D009148 1.3e-19 102.8 927 25.0
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.5e-15 89.4 222 30.6
CDE09G0581 Ceratophyllum demersum HOM05D007138 ORTHO05D009148 1.9e-15 89.0 360 28.1
Nn1g02395 Nelumbo nucifera HOM05D007138 ORTHO05D009148 2.5e-15 88.6 296 30.1
ATR0561G013 Amborella trichopoda HOM05D007138 ORTHO05D009148 5.9e-12 77.4 112 35.7
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.3e-08 65.5 145 35.2
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 5.1e-08 64.3 61 44.3
Ciclev10006158m.g Citrus clementina HOM05D007138 ORTHO05D009148 1.1e-07 63.2 98 36.7
Lalb_Chr12g0205851 Lupinus albus HOM05D007138 ORTHO05D009148 1.5e-07 62.8 321 25.2
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 3.3e-07 61.6 137 32.1
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 4.3e-07 61.2 123 30.9
Atru.chr3.1785 Acer truncatum HOM05D007138 ORTHO05D009148 1.7e-06 59.3 198 28.3
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 8.2e-06 57.0 109 33.0


User provided reference genes

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