Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 0.0e+00 1625.1 821 100.0
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 2.5e-153 547.0 659 50.4
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 4.8e-152 542.7 630 52.5
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 7.1e-148 528.9 714 47.1
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.8e-143 514.2 526 55.7
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.1e-143 513.5 640 49.4
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 6.9e-143 512.3 681 46.3
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 6.9e-143 512.3 613 48.0
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 7.4e-137 492.3 630 48.7
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.4e-135 488.0 594 48.8
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 2.4e-135 487.3 519 52.4
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 6.9e-135 485.7 555 51.7
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.5e-134 484.6 575 49.6
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 4.5e-134 483.0 634 47.6
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 5.8e-134 482.6 601 48.3
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.0e-133 481.9 604 47.5
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.3e-133 481.5 626 46.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.7e-133 481.1 575 49.7
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.9e-132 477.6 395 64.1
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 3.2e-132 476.9 587 49.6
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 5.5e-132 476.1 642 45.8
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 7.9e-131 472.2 935 38.2
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 1.0e-130 471.9 427 59.0
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.3e-129 466.8 665 46.0
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 2.1e-128 464.2 369 64.5
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 3.7e-128 463.4 392 62.0
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 4.8e-128 463.0 666 45.8
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 4.8e-128 463.0 491 54.8
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 9.0e-127 458.8 825 38.9
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.5e-126 458.0 616 45.1
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 5.5e-124 449.5 587 48.2
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 4.6e-123 446.4 596 45.8
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 3.0e-122 443.7 539 50.8
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 5.1e-122 443.0 531 50.1
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.1e-121 441.8 644 44.7
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 7.4e-121 439.1 644 44.1
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.6e-120 438.0 495 51.9
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.3e-120 436.0 576 46.2
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.3e-120 436.0 593 45.7
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 8.2e-120 435.6 644 43.9
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 2.4e-119 434.1 531 49.5
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 3.1e-119 433.7 613 45.5
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 4.1e-119 433.3 535 48.4
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 4.1e-119 433.3 589 46.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.2e-118 431.8 616 45.3
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.6e-118 430.6 430 54.2
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 1.0e-117 428.7 294 69.7
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 5.5e-116 422.9 564 45.9
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 5.1e-114 416.4 399 57.1
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 5.1e-114 416.4 415 55.9
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 6.7e-114 416.0 439 52.8
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 5.7e-113 412.9 531 48.2
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 7.4e-113 412.5 509 47.7
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.7e-112 411.4 545 45.1
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 3.1e-111 407.1 531 45.8
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 9.1e-111 405.6 506 48.2
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 2.6e-110 404.1 475 50.5
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 2.6e-110 404.1 552 48.6
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 6.1e-107 392.9 487 47.2
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 7.9e-107 392.5 380 56.1
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 3.0e-106 390.6 508 47.4
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.6e-105 387.5 405 52.6
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 3.3e-105 387.1 382 55.0
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 4.8e-104 383.3 375 55.7
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 4.8e-104 383.3 569 42.0
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.4e-103 380.9 407 52.3
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 2.4e-103 380.9 407 52.3
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 9.1e-103 379.0 560 43.0
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.2e-102 378.6 530 44.3
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 2.0e-102 377.9 439 48.7
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.0e-102 377.9 341 58.1
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 7.7e-102 375.9 330 57.6
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 5.0e-101 373.2 386 52.3
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 2.6e-97 360.9 280 63.6
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 2.6e-97 360.9 280 63.6
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.7e-96 358.2 509 46.0
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.7e-96 357.1 286 62.2
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 3.7e-96 357.1 286 62.2
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 2.2e-93 347.8 356 52.8
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.2e-92 343.6 557 40.4
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.0e-90 337.4 356 51.7
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.0e-89 334.7 303 55.8
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.7e-88 330.5 582 40.4
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 2.4e-87 327.8 361 50.1
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 5.4e-87 326.6 205 73.7
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 2.9e-85 320.9 359 51.5
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.9e-84 318.2 485 44.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 4.7e-83 313.5 370 48.4
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.0e-82 312.4 362 47.5
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 2.3e-82 311.2 206 70.4
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 4.4e-81 307.0 233 63.5
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 7.7e-78 296.2 414 45.7
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 5.6e-68 263.5 271 53.5
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.8e-67 261.2 336 47.0
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 4.4e-65 253.8 262 51.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.4e-63 248.1 516 35.5
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 5.4e-63 246.9 320 43.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 1.1e-58 232.6 440 39.8
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.2e-54 219.2 243 51.4
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 5.6e-52 210.3 117 81.2
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 6.2e-51 206.8 304 39.5
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 3.4e-49 201.1 117 78.6
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 2.2e-48 198.4 191 48.7
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 2.3e-45 188.3 535 30.8
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 9.0e-34 149.8 191 49.2
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 5.8e-33 147.1 172 53.5
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 5.8e-33 147.1 172 53.5
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 5.3e-26 124.0 176 47.7
QL93p0100_0715 Quercus lobata HOM05D006714 ORTHO05D008103 1.4e-10 72.8 218 30.7
Atru.chr1.1941 Acer truncatum HOM05D006714 ORTHO05D008103 1.4e-07 62.8 182 34.6


User provided reference genes

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