Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 5.9e-43 177.2 93 100.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.2e-32 142.9 91 74.7
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 8.1e-32 140.2 91 72.5
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.1e-31 139.8 91 72.5
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 5.2e-31 137.5 91 70.3
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 8.9e-31 136.7 91 72.5
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.9e-31 136.7 91 72.5
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 8.9e-31 136.7 91 72.5
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 8.9e-31 136.7 91 73.6
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 8.9e-31 136.7 91 74.7
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.5e-30 136.0 91 73.6
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.5e-30 136.0 91 70.3
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 7.5e-30 133.7 91 72.5
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.3e-29 132.9 91 69.2
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-29 132.5 91 72.5
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 1.7e-29 132.5 91 72.5
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.2e-29 132.1 91 72.5
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 1.6e-27 125.9 77 77.9
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 1.6e-27 125.9 88 69.3
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.6e-27 124.4 91 68.1
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 6.0e-27 124.0 77 77.9
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 6.0e-27 124.0 91 67.0
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.9e-26 121.3 91 67.0
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 5.1e-26 120.9 91 63.7
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 6.6e-26 120.6 89 66.3
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 8.6e-26 120.2 77 74.0
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.1e-25 119.8 74 73.0
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 1.5e-25 119.4 92 68.5
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 1.9e-25 119.0 90 66.7
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 1.9e-25 119.0 89 67.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 70 80.0
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 91 64.8
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 2.5e-25 118.6 74 71.6
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 4.3e-25 117.9 92 67.4
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 4.3e-25 117.9 91 62.6
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.3e-25 117.9 91 65.9
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.6e-25 117.5 91 64.8
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 5.6e-25 117.5 91 64.8
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 5.6e-25 117.5 77 72.7
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 7.3e-25 117.1 91 62.6
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.6e-24 115.9 92 66.3
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.6e-24 115.9 92 66.3
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.6e-24 115.9 90 63.3
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 1.6e-24 115.9 77 72.7
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 2.1e-24 115.5 90 65.6
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 2.8e-24 115.2 91 68.1
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 2.8e-24 115.2 74 68.9
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.8e-24 115.2 90 63.3
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.6e-24 114.8 77 71.4
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 3.6e-24 114.8 92 66.3
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 4.7e-24 114.4 92 67.4
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 4.7e-24 114.4 76 72.4
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 6.2e-24 114.0 80 65.0
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 6.2e-24 114.0 92 65.2
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 6.2e-24 114.0 74 68.9
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 8.1e-24 113.6 80 65.0
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.1e-23 113.2 91 62.6
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.1e-23 113.2 77 71.4
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.1e-23 113.2 78 70.5
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 59.3
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.4e-23 112.8 90 63.3
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.4e-23 112.8 92 58.7
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.8e-23 112.5 77 67.5
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 2.3e-23 112.1 91 61.5
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 8.9e-23 110.2 77 67.5
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 4.4e-22 107.8 91 59.3
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 2.2e-21 105.5 91 53.8
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 2.9e-21 105.1 78 64.1
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.9e-21 105.1 72 66.7
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 1.1e-20 103.2 91 57.1
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 1.1e-20 103.2 72 66.7
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 1.4e-20 102.8 91 58.2
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 4.1e-20 101.3 91 59.3
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 7.1e-20 100.5 72 65.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 1.2e-19 99.8 69 63.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.2e-19 99.8 72 63.9
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 1.6e-19 99.4 72 63.9
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.7e-18 95.9 79 59.5
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 3.9e-18 94.7 91 51.6
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 6.6e-18 94.0 49 81.6
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 8.6e-18 93.6 93 51.6
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 8.6e-18 93.6 65 64.6
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 5.6e-17 90.9 106 50.0
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 4.9e-13 77.8 99 40.4
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.1e-12 76.6 49 73.5
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.2e-11 73.2 50 70.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.6e-11 72.8 83 50.6
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 7.8e-11 70.5 60 56.7
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 3.0e-10 68.6 51 64.7
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.8e-08 62.0 69 47.8
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 6.2e-08 60.8 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 7.6e-06 53.9 46 60.9


User provided reference genes

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