Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 5.0e-58 227.6 121 100.0
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.0e-19 99.4 116 50.0
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 2.7e-19 99.0 116 49.1
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.7e-19 99.0 128 47.7
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.7e-19 99.0 128 47.7
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 4.6e-19 98.2 128 46.9
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 4.6e-19 98.2 128 46.9
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 6.0e-19 97.8 128 46.9
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 1.0e-18 97.1 128 46.1
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.0e-18 97.1 128 46.9
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 1.3e-18 96.7 128 44.5
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 1.7e-18 96.3 128 46.9
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.3e-18 95.9 128 46.1
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 3.0e-18 95.5 128 45.3
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 3.0e-18 95.5 115 47.0
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 3.0e-18 95.5 126 46.0
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 3.0e-18 95.5 115 47.0
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.0e-18 95.5 128 46.1
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.0e-18 94.7 128 44.5
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 5.0e-18 94.7 116 49.1
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 5.0e-18 94.7 128 46.1
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 6.6e-18 94.4 116 46.6
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 6.6e-18 94.4 128 46.1
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.5e-17 93.2 128 44.5
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 2.5e-17 92.4 128 44.5
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 2.5e-17 92.4 115 47.0
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 3.3e-17 92.0 128 45.3
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 3.3e-17 92.0 128 44.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 4.3e-17 91.7 128 44.5
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 5.6e-17 91.3 128 44.5
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 7.3e-17 90.9 125 45.6
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 9.5e-17 90.5 128 43.8
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 9.5e-17 90.5 115 47.0
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 9.5e-17 90.5 128 44.5
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 1.2e-16 90.1 115 47.0
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.2e-16 90.1 128 43.8
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.2e-16 90.1 128 43.8
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.2e-16 90.1 128 43.8
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.2e-16 90.1 128 44.5
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.6e-16 89.7 116 44.0
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 1.6e-16 89.7 128 46.1
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.6e-16 89.7 128 46.1
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.6e-16 89.7 128 46.1
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.6e-16 89.7 128 46.1
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 1.6e-16 89.7 116 44.0
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 2.8e-16 89.0 128 43.0
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 2.8e-16 89.0 128 43.0
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 2.8e-16 89.0 128 43.8
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 2.8e-16 89.0 128 43.8
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 2.8e-16 89.0 128 43.8
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 6.2e-16 87.8 128 43.8
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 6.2e-16 87.8 129 43.4
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 8.1e-16 87.4 128 43.0
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 8.1e-16 87.4 116 44.0
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 8.1e-16 87.4 116 44.8
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.4e-15 86.7 128 43.8
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.4e-15 86.7 128 43.8
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.8e-15 86.3 128 43.0
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 1.8e-15 86.3 128 42.2
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 2.3e-15 85.9 115 45.2
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 2.3e-15 85.9 128 43.8
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 4.0e-15 85.1 128 43.0
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 6.8e-15 84.3 115 41.7
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.0e-14 82.8 96 54.2
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 2.6e-14 82.4 128 43.8
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 2.6e-14 82.4 159 39.0
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.8e-14 81.3 110 45.5
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 5.8e-14 81.3 116 43.1
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 7.5e-14 80.9 119 42.9
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 9.8e-14 80.5 126 40.5
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.2e-13 79.3 116 40.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 2.2e-13 79.3 53 66.0
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 4.9e-13 78.2 116 41.4
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 6.4e-13 77.8 128 42.2
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 6.4e-13 77.8 137 41.6
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 6.4e-13 77.8 115 40.9
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 1.9e-12 76.3 118 41.5
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.9e-12 76.3 115 41.7
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 3.2e-12 75.5 52 65.4
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 7.1e-12 74.3 128 40.6
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 9.2e-12 73.9 112 40.2
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.7e-11 72.4 128 38.3
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 6.0e-11 71.2 72 56.9
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 7.8e-11 70.9 52 59.6
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-10 70.1 52 67.3
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 1.7e-10 69.7 126 38.1
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 7.3e-09 64.3 114 34.2
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 9.5e-09 63.9 64 48.4
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 2.8e-08 62.4 106 37.7
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 6.2e-08 61.2 96 39.6
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.8e-07 59.7 109 33.0
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 4.0e-07 58.5 124 36.3
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 5.2e-07 58.2 114 34.2
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 8.9e-07 57.4 128 32.8
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 2.0e-06 56.2 102 37.3


User provided reference genes

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