Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 4.0e-143 511.5 283 100.0
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 8.6e-93 344.4 273 67.8
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 1.2e-89 334.0 283 65.7
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 4.5e-86 322.0 280 63.2
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 7.8e-86 321.2 291 64.9
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.0e-85 320.9 275 69.1
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 5.2e-82 308.5 279 64.2
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 5.2e-82 308.5 213 70.9
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 7.5e-81 304.7 274 63.1
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 9.8e-81 304.3 213 70.4
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 2.2e-80 303.1 214 69.2
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 3.7e-80 302.4 281 61.9
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.1e-79 300.8 288 59.0
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 2.4e-79 299.7 226 67.3
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.2e-79 299.3 274 62.4
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 3.2e-79 299.3 210 69.0
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 4.1e-79 298.9 272 63.2
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.2e-78 297.4 270 60.4
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.6e-78 297.0 270 60.4
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.6e-78 297.0 269 62.5
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.6e-78 297.0 210 68.6
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 2.0e-78 296.6 210 68.6
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 3.5e-78 295.8 274 61.7
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.0e-78 295.0 288 60.1
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 3.0e-77 292.7 274 56.6
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 3.0e-77 292.7 201 75.6
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 3.9e-77 292.4 279 58.4
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 5.0e-77 292.0 270 55.6
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 6.6e-77 291.6 216 66.7
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 1.5e-76 290.4 279 57.7
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.9e-76 290.0 282 55.3
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 4.3e-76 288.9 268 57.8
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 5.6e-76 288.5 279 57.7
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 5.6e-76 288.5 279 57.7
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 7.3e-76 288.1 280 56.4
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 7.3e-76 288.1 244 61.5
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 7.3e-76 288.1 215 67.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 9.5e-76 287.7 210 67.1
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 1.6e-75 287.0 279 57.3
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 2.1e-75 286.6 216 64.8
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 4.7e-75 285.4 276 57.6
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 6.2e-75 285.0 276 56.2
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 6.2e-75 285.0 273 55.3
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 8.0e-75 284.6 287 56.1
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 1.1e-74 284.3 284 58.5
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.8e-74 283.5 213 67.6
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 3.1e-74 282.7 214 65.9
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 3.1e-74 282.7 218 67.0
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 6.8e-74 281.6 270 58.5
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.5e-73 280.4 217 65.9
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 2.0e-73 280.0 214 65.9
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 5.8e-73 278.5 224 64.3
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 9.8e-73 277.7 208 66.8
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.7e-72 276.9 212 67.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.2e-72 276.6 211 67.8
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 2.9e-72 276.2 280 58.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 2.9e-72 276.2 277 56.0
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 6.4e-72 275.0 290 53.8
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 6.4e-72 275.0 216 64.8
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 8.3e-72 274.6 214 65.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 8.3e-72 274.6 222 63.1
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.1e-71 274.2 280 58.6
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.4e-71 273.9 271 52.8
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 3.2e-71 272.7 275 54.2
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.7e-70 269.6 280 54.3
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 2.7e-70 269.6 245 58.8
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 6.0e-70 268.5 212 62.3
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 7.8e-70 268.1 214 67.3
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.3e-69 266.5 220 61.4
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 3.9e-69 265.8 232 59.1
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 1.1e-68 264.2 269 52.8
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.5e-68 263.8 268 57.1
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 9.5e-68 261.2 226 61.9
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 1.2e-67 260.8 218 58.3
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 2.1e-67 260.0 269 52.4
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.1e-66 257.7 212 66.5
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.1e-66 257.7 179 72.1
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.8e-66 256.9 175 71.4
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 2.6e-65 253.1 215 61.9
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 4.4e-65 252.3 206 63.1
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 9.9e-65 251.1 240 62.5
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 9.9e-65 251.1 203 64.0
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 2.2e-64 250.0 209 57.4
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 1.1e-63 247.7 192 64.6
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 1.9e-63 246.9 215 58.6
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.4e-63 246.5 174 67.8
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 5.4e-63 245.4 182 67.0
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 7.8e-62 241.5 266 53.4
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 1.3e-61 240.7 182 66.5
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.3e-61 240.0 171 70.2
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.5e-60 237.3 186 67.2
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 3.4e-57 226.1 216 53.2
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 4.9e-56 222.2 237 61.6
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 1.2e-54 217.6 290 45.5
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 1.5e-52 210.7 244 50.4
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 5.6e-52 208.8 227 51.1
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 3.2e-47 193.0 204 51.0
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.2e-46 191.0 180 53.3
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.6e-46 190.7 223 47.5
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 1.3e-45 187.6 190 57.9
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 5.1e-45 185.7 174 55.2
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 1.9e-44 183.7 188 59.6
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 7.3e-44 181.8 137 71.5
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.7e-40 170.6 232 47.4
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 1.1e-39 167.9 196 43.4
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 1.9e-39 167.2 224 41.5
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.2e-38 164.5 261 43.3
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.7e-38 163.3 224 42.4
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 6.7e-37 158.7 95 82.1
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 1.5e-36 157.5 95 82.1
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 3.3e-36 156.4 94 79.8
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 2.8e-35 153.3 131 59.5
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.2e-35 152.1 172 46.5
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 1.8e-34 150.6 155 56.1
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 1.4e-31 141.0 191 50.3
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 2.4e-31 140.2 195 40.0
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 5.5e-31 139.0 224 38.4
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.5e-28 130.2 90 70.0
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 4.0e-26 122.9 201 40.3
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.4e-24 115.2 192 44.3
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 4.6e-22 109.4 98 54.1
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.9e-15 87.4 61 67.2
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 1.5e-09 67.8 88 42.0
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 5.9e-09 65.9 52 59.6
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 1.3e-08 64.7 51 58.8


User provided reference genes

Program Settings