Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 2.0e-127 459.1 240 100.0
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.9e-29 133.7 163 47.2
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 1.3e-28 131.0 142 53.5
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.4e-27 126.7 148 47.3
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.2e-26 124.4 123 52.8
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 2.0e-26 123.6 115 52.2
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 3.4e-26 122.9 116 55.2
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 4.5e-26 122.5 148 46.6
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 7.6e-26 121.7 160 46.2
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 1.3e-25 120.9 161 44.1
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 2.9e-25 119.8 133 47.4
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 4.2e-24 115.9 128 48.4
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 2.1e-23 113.6 155 45.8
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.7e-23 113.2 187 40.6
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 3.6e-23 112.8 156 39.7
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 3.6e-23 112.8 187 40.6
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 1.0e-22 111.3 169 39.6
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 1.8e-22 110.5 93 59.1
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 3.9e-22 109.4 157 43.3
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 6.7e-22 108.6 100 53.0
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 6.7e-22 108.6 165 41.8
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 8.7e-22 108.2 96 53.1
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 8.7e-22 108.2 167 41.9
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 1.1e-21 107.8 143 44.1
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 1.1e-21 107.8 143 44.1
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 1.1e-21 107.8 155 41.9
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 1.5e-21 107.5 157 38.9
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 1.5e-21 107.5 142 43.7
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 1.9e-21 107.1 165 41.2
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.5e-21 106.7 234 36.8
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 4.3e-21 105.9 160 43.8
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 4.3e-21 105.9 128 49.2
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 5.7e-21 105.5 202 36.1
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 5.7e-21 105.5 132 47.7
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 7.4e-21 105.1 167 43.1
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 7.4e-21 105.1 182 40.7
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 9.7e-21 104.8 115 50.4
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 9.7e-21 104.8 234 38.0
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 2.8e-20 103.2 157 43.3
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 2.8e-20 103.2 157 43.3
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 4.8e-20 102.4 173 43.4
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 4.8e-20 102.4 127 42.5
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 6.3e-20 102.1 136 42.6
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 8.2e-20 101.7 160 40.6
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 8.2e-20 101.7 157 40.1
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.1e-19 101.3 194 39.7
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 1.1e-19 101.3 177 39.5
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.4e-19 100.9 103 46.6
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 1.4e-19 100.9 157 40.8
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 1.8e-19 100.5 183 39.9
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.8e-19 100.5 186 37.6
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 3.1e-19 99.8 128 46.9
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 3.1e-19 99.8 136 41.9
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 5.3e-19 99.0 109 45.9
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 6.9e-19 98.6 196 36.7
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 6.9e-19 98.6 155 37.4
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 9.1e-19 98.2 163 42.3
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 9.1e-19 98.2 101 50.5
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 9.1e-19 98.2 99 48.5
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 1.2e-18 97.8 173 39.3
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 1.2e-18 97.8 106 47.2
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.0e-18 97.1 182 36.8
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 2.6e-18 96.7 162 41.4
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 2.6e-18 96.7 177 39.5
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 1.7e-17 94.0 191 35.6
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 2.2e-17 93.6 113 40.7
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 2.2e-17 93.6 205 36.6
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 2.2e-17 93.6 127 40.9
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 2.9e-17 93.2 148 40.5
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 3.8e-17 92.8 155 38.1
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 5.0e-17 92.4 111 45.9
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 6.5e-17 92.0 183 36.6
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 8.5e-17 91.7 115 43.5
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 8.5e-17 91.7 180 35.6
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 1.1e-16 91.3 84 52.4
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 1.9e-16 90.5 184 37.0
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 3.2e-16 89.7 139 39.6
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 4.2e-16 89.4 147 38.8
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 1.2e-15 87.8 131 38.2
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 1.6e-15 87.4 98 43.9
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 1.6e-15 87.4 179 36.3
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 2.7e-15 86.7 110 47.3
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 2.7e-15 86.7 146 38.4
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 3.6e-15 86.3 148 36.5
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 3.0e-14 83.2 111 40.5
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 6.7e-14 82.0 151 36.4
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 5.7e-13 79.0 170 35.3
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 7.4e-13 78.6 82 46.3
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 1.3e-12 77.8 200 30.5
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 4.8e-12 75.9 145 36.6
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 6.3e-12 75.5 135 40.7
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 8.2e-12 75.1 129 38.8
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 8.2e-12 75.1 131 33.6
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 1.4e-11 74.3 148 33.8
MSTRG.18481 Avicennia marina HOM05D000489 ORTHO05D000372 9.1e-11 71.6 155 36.8
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 3.4e-10 69.7 134 30.6
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 2.2e-09 67.0 75 40.0
Peaxi162Scf00978g00116 Petunia axillaris HOM05D000489 ORTHO05D000372 7.2e-08 62.0 110 38.2
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.2e-07 61.2 73 42.5
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.7e-07 60.1 76 35.5
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 2.7e-07 60.1 76 35.5
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.1e-07 58.9 79 38.0
SEGI_37893 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 8.0e-07 58.5 76 35.5
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 1.0e-06 58.2 49 55.1
Os01g0607100 Oryza sativa ssp. japonica HOM05D032292 ORTHO05D009025 2.3e-06 57.0 179 29.6
Oeu048803.2 Olea europaea HOM05D000489 ORTHO05D000372 5.2e-06 55.8 111 34.2


User provided reference genes

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