Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.8e-174 614.8 321 100.0
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 7.7e-66 255.0 178 75.3
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.1e-64 251.1 179 73.2
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.5e-64 250.0 178 74.7
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 5.5e-64 248.8 179 73.7
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 9.5e-64 248.1 179 73.7
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.1e-63 246.9 178 73.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.0e-62 244.6 179 70.4
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 8.9e-62 241.5 179 71.5
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 5.7e-61 238.8 175 74.3
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.4e-59 234.2 177 71.2
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.4e-59 233.4 179 68.7
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 3.2e-59 233.0 177 71.8
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 9.2e-59 231.5 199 63.8
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.2e-58 231.1 178 69.1
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.6e-58 230.7 190 64.7
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.6e-58 230.7 175 70.3
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 2.0e-58 230.3 179 69.8
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 5.9e-58 228.8 179 71.5
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.3e-57 226.9 177 71.8
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 3.9e-57 226.1 175 72.0
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.1e-56 224.6 177 70.1
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.5e-56 224.2 199 64.3
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.9e-56 223.8 179 68.7
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.3e-56 223.0 190 63.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 4.3e-56 222.6 197 61.9
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 5.6e-56 222.2 225 57.3
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 5.6e-56 222.2 177 71.2
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 7.3e-56 221.9 166 71.1
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.6e-55 220.7 181 67.4
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 2.8e-55 219.9 178 66.3
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 3.6e-55 219.5 167 71.3
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 4.7e-55 219.2 206 61.7
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 6.1e-55 218.8 177 66.7
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 6.1e-55 218.8 178 68.0
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 6.1e-55 218.8 188 65.4
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.0e-54 218.0 205 62.9
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.1e-54 216.5 178 65.7
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 4.0e-54 216.1 211 57.3
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 4.0e-54 216.1 181 66.9
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 6.8e-54 215.3 179 68.2
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 8.9e-54 214.9 181 66.3
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 8.9e-54 214.9 179 66.5
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.2e-53 214.5 169 69.2
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 1.5e-53 214.2 178 66.3
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 3.4e-53 213.0 175 68.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.4e-53 213.0 175 68.6
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.4e-53 213.0 181 66.3
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 7.5e-53 211.8 207 59.9
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 9.8e-53 211.5 175 68.0
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.3e-52 211.1 174 65.5
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 1.7e-52 210.7 169 65.7
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.7e-52 210.7 167 68.9
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 3.7e-52 209.5 181 63.5
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 3.7e-52 209.5 165 68.5
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 4.9e-52 209.1 176 67.0
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 6.4e-52 208.8 176 64.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 8.3e-52 208.4 166 67.5
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.1e-51 208.0 167 69.5
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.9e-51 207.2 172 65.1
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.9e-51 207.2 166 66.9
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 2.4e-51 206.8 178 64.0
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 2.4e-51 206.8 167 69.5
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 3.2e-51 206.5 179 64.8
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 3.2e-51 206.5 186 60.8
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 5.4e-51 205.7 202 58.9
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 9.2e-51 204.9 183 62.3
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.2e-50 204.5 166 68.7
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.6e-50 204.1 199 57.8
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.7e-50 203.4 168 67.9
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 3.5e-50 203.0 174 66.1
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 4.6e-50 202.6 178 62.9
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 6.0e-50 202.2 184 60.9
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.0e-49 201.4 189 57.1
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.3e-49 201.1 143 73.4
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 3.0e-49 199.9 178 62.4
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 3.9e-49 199.5 176 63.6
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 5.0e-49 199.1 181 63.5
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 5.0e-49 199.1 177 60.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 6.6e-49 198.7 131 77.1
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.6e-49 198.7 166 66.3
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.1e-48 198.0 131 77.1
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.9e-48 197.2 188 59.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.9e-48 197.2 179 60.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.5e-48 196.8 188 59.6
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.5e-48 196.8 166 66.3
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.3e-48 196.4 161 64.6
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 4.3e-48 196.1 131 74.8
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 5.6e-48 195.7 131 76.3
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 7.3e-48 195.3 150 70.0
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 9.5e-48 194.9 138 73.2
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 1.2e-47 194.5 161 64.0
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 1.6e-47 194.1 165 66.7
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 8.0e-47 191.8 138 73.2
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 8.9e-46 188.3 168 60.7
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 7.8e-42 175.3 179 58.1
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.7e-41 174.1 186 52.7
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.1e-40 171.4 128 72.7
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 5.6e-40 169.1 98 88.8
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.3e-36 157.9 161 56.5
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 6.4e-36 155.6 202 44.6
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 3.9e-33 146.4 140 55.0
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.9e-32 144.1 101 73.3
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 3.3e-32 143.3 123 57.7
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.2e-31 139.0 135 58.5
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 6.4e-28 129.0 134 47.0
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.7e-25 120.9 92 66.3
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 5.6e-24 115.9 113 58.4
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 4.9e-20 102.8 70 75.7
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 4.3e-16 89.7 114 43.0
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 7.4e-08 62.4 188 34.0
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 3.1e-06 57.0 96 50.0


User provided reference genes

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