Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.6e-106 389.4 197 100.0
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.5e-59 233.4 194 63.9
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.3e-58 230.3 194 63.4
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.8e-58 229.2 193 65.3
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 9.0e-57 224.2 194 60.3
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 2.0e-56 223.0 200 60.5
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 7.6e-56 221.1 199 61.8
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.3e-55 220.3 196 61.2
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.9e-55 219.2 197 60.4
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 8.4e-55 217.6 195 60.0
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.4e-54 216.9 196 59.2
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.9e-54 216.5 195 60.0
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 7.1e-54 214.5 197 57.4
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 9.3e-54 214.2 195 59.5
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-53 213.8 195 59.5
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 2.1e-53 213.0 198 61.1
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 2.1e-53 213.0 194 58.8
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.7e-53 212.6 195 59.0
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 7.9e-53 211.1 198 57.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 7.9e-53 211.1 199 60.8
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 7.9e-53 211.1 192 59.4
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.3e-52 210.3 187 62.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 6.7e-52 208.0 192 58.3
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 6.7e-52 208.0 193 59.6
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 8.7e-52 207.6 195 60.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.9e-51 206.5 196 60.2
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 3.3e-51 205.7 191 58.6
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.8e-50 202.6 195 56.9
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.2e-50 201.4 198 55.1
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 6.2e-50 201.4 195 54.9
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.8e-49 199.9 195 55.9
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 2.4e-49 199.5 195 55.4
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 3.1e-49 199.1 191 57.1
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 5.3e-49 198.4 191 57.6
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 5.3e-49 198.4 193 57.0
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.0e-48 196.4 192 55.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.0e-48 196.4 191 58.6
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.6e-48 196.1 195 54.4
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.6e-48 196.1 192 57.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.5e-48 195.3 191 55.5
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 4.5e-48 195.3 202 52.5
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 5.8e-48 194.9 195 57.4
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 7.6e-48 194.5 196 55.6
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 2.9e-47 192.6 197 54.3
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.9e-47 192.6 188 55.9
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 8.4e-47 191.0 194 55.7
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 8.4e-47 191.0 195 54.4
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 2.5e-46 189.5 194 55.7
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 3.2e-46 189.1 196 54.6
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 7.1e-46 188.0 194 52.6
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 7.1e-46 188.0 191 54.5
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 7.1e-46 188.0 195 52.8
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 9.3e-46 187.6 195 50.3
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.6e-45 186.8 191 53.9
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.7e-45 186.0 191 55.5
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 3.5e-45 185.7 198 53.5
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 4.6e-45 185.3 162 60.5
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 6.0e-45 184.9 192 54.7
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 7.9e-45 184.5 191 53.9
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.0e-44 184.1 129 66.7
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.3e-44 183.7 202 51.5
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.8e-44 183.3 193 52.8
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.8e-44 183.3 193 52.8
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.3e-44 183.0 193 53.4
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 5.1e-44 181.8 195 50.8
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 5.1e-44 181.8 186 51.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 8.7e-44 181.0 130 68.5
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.1e-43 180.6 193 50.3
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.5e-43 180.3 191 52.9
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.5e-43 179.5 191 52.4
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 2.5e-43 179.5 191 52.9
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 3.3e-43 179.1 194 52.6
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 3.3e-43 179.1 191 51.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 4.3e-43 178.7 191 52.4
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 9.6e-43 177.6 191 51.3
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 9.6e-43 177.6 191 50.8
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 1.3e-42 177.2 192 52.1
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.6e-42 176.8 193 52.3
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.8e-42 176.0 191 50.8
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.8e-42 176.0 191 50.8
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 3.7e-42 175.6 195 51.8
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.4e-41 173.7 193 50.8
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.4e-41 173.7 194 50.5
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 1.4e-41 173.7 194 50.5
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 2.4e-41 172.9 230 46.5
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 4.0e-41 172.2 186 52.2
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 4.0e-41 172.2 192 50.0
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.0e-40 169.9 114 71.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.0e-40 169.9 191 48.7
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 8.4e-39 164.5 194 49.0
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.4e-38 163.7 130 63.1
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 5.5e-38 161.8 190 47.4
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 9.3e-38 161.0 139 57.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 9.3e-38 161.0 139 57.6
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 9.3e-38 161.0 139 57.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.2e-37 160.6 191 45.5
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.7e-37 159.5 194 49.0
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.8e-36 156.8 191 47.1
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.8e-36 156.8 113 64.6
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 2.5e-35 152.9 127 63.0
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.3e-35 152.1 132 51.5
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.4e-33 147.1 111 64.0
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.4e-33 146.4 156 48.7
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 2.0e-32 143.3 124 58.1
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 3.4e-32 142.5 124 57.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 5.0e-31 138.7 127 52.0
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.7e-29 132.9 188 43.6
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.4e-28 130.6 133 58.6
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 2.5e-27 126.3 201 39.8
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.4e-25 119.8 91 61.5
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 4.1e-25 119.0 203 39.9
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.0e-24 116.7 191 40.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 4.5e-24 115.5 78 67.9
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.7e-23 113.6 94 55.3
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 7.2e-22 108.2 101 63.4
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.0e-20 102.8 91 49.5
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 8.8e-20 101.3 112 49.1
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 5.3e-17 92.0 124 37.9
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.0e-16 90.1 64 67.2
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 3.2e-14 82.8 173 36.4
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.2e-14 82.8 102 50.0
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.6e-13 79.3 99 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.3e-12 76.6 109 36.7
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.3e-10 70.9 116 36.2
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 7.7e-08 61.6 46 63.0
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 1.1e-06 57.8 36 72.2
arahy.Tifrunner.gnm1.ann1.LB6QPX Arachis hypogaea HOM05D006081 ORTHO05D007628 1.5e-06 57.4 36 72.2


User provided reference genes

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