Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.5e-89 331.3 170 100.0
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 8.5e-88 327.0 170 97.6
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.9e-87 325.9 170 98.2
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.5e-87 325.5 170 98.2
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.5e-87 325.5 170 98.2
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.2e-87 324.7 170 97.1
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 5.5e-87 324.3 169 98.2
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 5.5e-87 324.3 170 97.1
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 5.5e-87 324.3 170 97.1
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 7.2e-87 323.9 170 97.6
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 9.4e-87 323.6 170 97.1
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.2e-86 323.2 170 98.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.6e-86 322.8 170 97.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.6e-86 322.8 170 97.1
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.6e-86 322.8 170 96.5
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.1e-86 322.4 170 95.9
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 96.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 95.9
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 97.1
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 96.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 3.6e-86 321.6 170 96.5
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.9
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.9
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.9
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 6.1e-86 320.9 170 95.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.9
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.3
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 95.9
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 7.9e-86 320.5 170 96.5
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.0e-85 320.1 170 95.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 94.7
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 1.4e-85 319.7 170 95.3
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.4e-85 319.7 169 96.4
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.9
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.3e-85 318.9 170 95.3
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.3
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 3.0e-85 318.5 167 97.6
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.0e-85 318.5 170 95.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 3.9e-85 318.2 170 94.1
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 5.2e-85 317.8 169 95.9
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.1e-84 316.6 170 94.7
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 95.8
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 95.8
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.1e-84 316.6 168 95.8
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.5e-84 316.2 170 94.7
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.6e-84 315.5 170 94.1
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.3e-84 315.1 176 93.8
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 4.4e-84 314.7 170 94.7
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 7.4e-84 313.9 168 92.9
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 7.4e-84 313.9 170 93.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.3e-83 313.2 168 94.6
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.8e-83 312.0 170 92.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 3.7e-83 311.6 170 92.9
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 6.3e-83 310.8 170 92.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.4e-82 309.7 167 93.4
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.8e-82 309.3 183 89.1
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.8e-82 309.3 166 92.8
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 7.0e-82 307.4 183 88.5
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.6e-81 306.2 170 94.1
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.6e-81 306.2 188 85.1
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.6e-81 305.4 190 86.8
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 3.5e-81 305.1 169 93.5
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 7.7e-81 303.9 170 92.4
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.0e-80 303.5 170 89.4
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 2.9e-80 302.0 169 92.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 8.5e-80 300.4 168 90.5
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 4.2e-79 298.1 157 95.5
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 2.7e-78 295.4 168 87.5
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 3.6e-78 295.0 157 94.3
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 6.1e-78 294.3 167 87.4
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.8e-77 292.7 162 93.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.7e-77 290.8 175 89.1
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 8.8e-77 290.4 151 97.4
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.4e-74 282.3 164 87.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.4e-74 282.3 150 95.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 3.1e-74 282.0 147 97.3
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 7.0e-74 280.8 147 97.3
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 7.0e-74 280.8 151 93.4
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 6.5e-72 274.2 147 94.6
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.1e-70 269.2 139 97.8
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 2.7e-70 268.9 140 96.4
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 8.0e-70 267.3 140 95.7
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.0e-69 266.9 169 76.3
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 6.8e-69 264.2 139 95.7
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.4e-68 261.5 262 59.9
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 5.7e-68 261.2 139 94.2
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 5.7e-68 261.2 170 81.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 3.5e-65 251.9 164 81.1
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.3e-64 250.0 170 80.6
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.9e-63 246.1 170 78.8
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 3.2e-63 245.4 128 96.9
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.7e-62 242.3 168 77.4
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 8.0e-62 240.7 130 95.4
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.8e-59 232.3 229 62.4
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 8.3e-59 230.7 125 95.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.8e-58 229.6 120 98.3
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.8e-58 229.6 120 98.3
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.8e-58 229.6 233 60.1
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 1.3e-56 223.4 129 86.8
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.6e-52 209.1 109 98.2
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 6.4e-51 204.5 169 60.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.1e-50 203.8 110 94.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 2.6e-44 182.6 115 82.6
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 7.0e-42 174.5 176 52.3
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 8.6e-40 167.5 170 57.6
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 4.1e-34 148.7 76 97.4
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 4.6e-33 145.2 75 96.0
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 6.0e-33 144.8 117 67.5
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.0e-32 144.1 75 94.7
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 2.7e-25 119.4 73 79.5
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 5.1e-24 115.2 78 80.8
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 1.9e-23 113.2 60 93.3
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.4e-18 97.1 50 94.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.0e-13 79.0 38 92.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-10 70.9 39 84.6
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.5e-07 59.7 59 59.3


User provided reference genes

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