Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 8.5e-184 647.1 389 100.0
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.9e-95 353.6 393 58.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.0e-91 341.3 405 54.3
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 2.2e-91 340.1 403 57.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.9e-90 337.0 403 54.8
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.3e-88 330.1 392 57.1
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 8.7e-88 328.2 403 54.8
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 1.5e-87 327.4 390 55.6
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.5e-87 326.6 356 58.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.5e-84 317.4 399 53.4
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 2.0e-84 317.0 492 49.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.0e-84 317.0 407 56.8
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 3.4e-84 316.2 394 53.3
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 5.8e-84 315.5 400 54.0
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 6.5e-83 312.0 400 54.0
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 1.1e-82 311.2 395 52.4
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 3.2e-82 309.7 398 54.0
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 4.6e-81 305.8 340 64.1
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.0e-80 304.7 414 52.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.3e-80 303.5 328 59.1
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 3.0e-80 303.1 408 52.0
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.3e-79 299.7 412 51.2
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.4e-77 294.3 306 55.6
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 4.5e-76 289.3 373 60.3
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.0e-75 288.1 378 54.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 2.2e-75 287.0 299 55.5
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 2.9e-75 286.6 405 51.6
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 6.5e-75 285.4 382 52.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 4.2e-74 282.7 313 51.1
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.6e-73 280.8 374 55.1
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 2.7e-73 280.0 271 57.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.0e-72 278.1 377 55.2
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.0e-72 278.1 358 52.2
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.7e-72 275.4 374 51.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 6.7e-72 275.4 295 53.9
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.5e-71 274.2 301 58.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.3e-71 273.1 322 55.6
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 4.3e-71 272.7 390 49.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 7.4e-71 271.9 305 58.7
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 9.7e-71 271.6 371 52.3
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.3e-70 271.2 422 49.1
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 1.3e-70 271.2 375 50.1
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.7e-70 270.8 302 52.3
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 6.3e-70 268.9 308 51.0
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 8.2e-70 268.5 389 51.2
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.4e-69 267.7 274 55.8
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.8e-69 267.3 295 49.8
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 5.3e-69 265.8 401 50.4
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 6.9e-69 265.4 364 51.4
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 9.1e-69 265.0 383 55.1
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.5e-68 264.2 263 55.9
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 2.6e-68 263.5 389 49.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 7.7e-68 261.9 385 48.1
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.3e-67 261.2 198 68.7
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.9e-66 257.3 408 51.2
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.9e-66 257.3 417 48.9
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 2.5e-66 256.9 220 60.9
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.2e-66 256.5 267 55.4
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 4.2e-66 256.1 398 50.8
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 4.2e-66 256.1 375 52.0
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 5.5e-66 255.8 400 49.0
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 2.1e-65 253.8 369 53.1
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.1e-65 253.8 400 48.8
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.6e-65 253.1 397 49.9
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 7.9e-65 251.9 290 49.7
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 7.9e-65 251.9 426 47.7
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 7.9e-65 251.9 386 49.5
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.0e-64 251.5 456 43.6
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.8e-64 250.8 398 50.3
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 1.1e-63 248.1 286 51.7
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.1e-63 248.1 391 54.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.0e-63 247.3 369 50.7
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 4.4e-63 246.1 286 53.8
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 7.4e-63 245.4 284 51.8
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.3e-62 244.6 276 55.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.2e-62 243.8 364 47.8
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 2.2e-62 243.8 361 48.2
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.4e-61 241.1 199 64.3
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 9.1e-61 238.4 216 58.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.5e-60 237.7 415 48.0
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 2.0e-60 237.3 272 55.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 3.5e-60 236.5 387 51.2
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 3.5e-60 236.5 215 57.7
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 5.9e-60 235.7 415 47.0
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.2e-59 233.8 294 49.3
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 2.2e-59 233.8 269 52.0
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 3.8e-59 233.0 214 57.0
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 5.0e-59 232.6 265 49.4
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 5.5e-58 229.2 183 64.5
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 9.4e-58 228.4 360 50.0
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 2.1e-57 227.3 270 58.1
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 4.7e-57 226.1 454 40.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.1e-55 221.5 254 49.2
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 7.5e-55 218.8 223 52.9
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 6.3e-54 215.7 295 43.4
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.0e-51 208.4 250 50.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.9e-50 204.1 348 48.6
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 2.1e-49 200.7 190 55.8
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 4.0e-48 196.4 281 42.7
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 8.8e-48 195.3 372 42.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 6.3e-46 189.1 168 60.1
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 2.4e-45 187.2 268 50.4
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 4.2e-42 176.4 199 48.7
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 8.8e-40 168.7 186 52.2
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 2.0e-39 167.5 230 41.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.0e-35 155.2 272 42.3
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.3e-34 149.8 210 38.6
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 9.5e-34 148.7 209 44.0
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.4e-32 144.8 214 40.7
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 9.8e-31 138.7 147 50.3
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 8.3e-30 135.6 204 40.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.6e-28 131.3 171 45.6
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 5.2e-24 116.3 180 40.6
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.2e-14 84.3 64 70.3
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.4e-13 81.6 58 70.7
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 4.3e-10 70.1 165 46.7
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 3.7e-06 57.0 133 32.3


User provided reference genes

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