Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.8e-132 475.3 247 100.0
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 4.5e-114 414.8 246 83.3
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 7.7e-114 414.1 246 83.3
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.1e-112 410.2 246 82.1
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 5.5e-112 407.9 245 83.3
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 2.1e-111 406.0 245 82.4
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 6.1e-111 404.4 246 81.7
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 7.9e-111 404.1 243 82.7
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.3e-110 402.5 246 82.1
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 3.0e-110 402.1 245 81.6
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 3.9e-110 401.7 245 81.6
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 6.7e-110 401.0 241 83.0
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 6.7e-110 401.0 246 81.3
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.5e-109 399.8 245 80.8
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.6e-109 399.1 246 80.1
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.4e-109 398.3 245 80.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 79.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 81.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.4e-107 393.3 242 80.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.4e-107 392.5 247 78.1
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 2.4e-107 392.5 245 78.4
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.1e-107 391.7 242 80.6
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 5.3e-107 391.3 245 80.8
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 9.1e-107 390.6 245 78.4
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.6e-106 389.0 245 78.4
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 2.6e-106 389.0 240 80.8
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.0e-105 387.1 245 76.7
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.2e-105 386.0 245 77.6
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 77.6
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 3.8e-105 385.2 245 77.1
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.5e-104 383.3 245 77.6
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.5e-104 383.3 259 74.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 4.2e-104 381.7 246 76.4
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 5.5e-104 381.3 245 76.3
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 9.4e-104 380.6 247 76.1
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 1.6e-103 379.8 246 76.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 1.6e-103 379.8 246 76.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.1e-103 379.4 246 76.4
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.1e-103 379.4 246 76.8
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 6.1e-103 377.9 245 77.1
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 6.1e-103 377.9 245 76.3
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 8.0e-103 377.5 245 75.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.0e-102 377.1 245 75.9
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.0e-102 377.1 245 75.9
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.0e-102 377.1 245 75.9
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 1.0e-102 377.1 246 75.6
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.4e-102 376.7 245 75.5
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.8e-102 376.3 245 75.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.3e-102 375.9 245 75.5
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-102 375.9 245 75.9
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.9e-102 375.2 245 75.5
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.9e-102 375.2 244 76.2
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.9e-102 375.2 246 77.2
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 3.9e-102 375.2 245 75.9
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 3.9e-102 375.2 245 75.5
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 5.2e-102 374.8 244 75.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 5.2e-102 374.8 244 75.8
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 5.2e-102 374.8 247 75.7
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 8.8e-102 374.0 245 75.9
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.1e-101 373.6 264 73.1
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.1e-101 373.6 245 75.9
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.5e-101 373.2 249 75.5
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 7.4e-101 370.9 246 74.0
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 4.8e-100 368.2 245 78.0
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.4e-99 366.7 245 74.3
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.8e-99 366.3 247 73.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 2.4e-99 365.9 252 74.2
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 5.3e-99 364.8 245 73.9
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.2e-98 363.6 245 75.9
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 7.7e-98 360.9 245 74.3
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.0e-97 360.5 245 71.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.7e-97 359.8 246 71.5
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.2e-95 353.6 246 72.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 4.7e-95 351.7 240 71.7
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.8e-94 349.7 247 72.9
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.3e-94 349.4 245 71.4
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.0e-94 349.0 245 71.4
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.2e-93 347.1 202 85.1
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.5e-93 346.7 234 72.2
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 4.4e-93 345.1 202 85.6
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.1e-91 340.5 245 69.4
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 3.5e-90 335.5 242 68.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.0e-89 334.0 227 73.6
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.3e-89 333.6 212 79.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 5.0e-89 331.6 228 72.8
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.5e-88 330.1 246 68.3
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 7.2e-88 327.8 246 65.0
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.0e-86 323.9 185 87.0
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.3e-86 322.8 245 64.5
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 5.7e-85 318.2 246 63.4
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.3e-84 317.0 245 66.9
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.4e-83 312.8 198 74.7
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 6.6e-81 304.7 202 78.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.1e-79 299.7 246 65.0
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 5.7e-77 291.6 194 70.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.0e-74 283.1 259 65.3
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 5.9e-74 281.6 245 62.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.3e-70 269.6 246 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 5.8e-69 265.0 242 54.1
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.2e-66 257.3 242 52.1
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 8.9e-62 241.1 233 54.5
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.2e-60 236.5 239 52.3
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.4e-59 233.0 203 64.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 4.1e-59 232.3 156 73.7
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.3e-57 226.5 235 48.1
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.0e-49 199.5 153 65.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-48 196.1 153 64.1
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 4.3e-48 195.7 161 62.1
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 4.3e-48 195.7 114 84.2
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 7.3e-48 194.9 154 63.0
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.6e-47 192.6 118 82.2
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 6.2e-47 191.8 139 68.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.9e-36 156.4 119 66.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.5e-34 149.4 92 79.3
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 2.1e-31 140.2 91 73.6
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 4.0e-30 136.0 230 39.1
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 9.9e-29 131.3 93 72.0
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.0e-17 94.7 71 63.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.3e-16 89.4 162 45.7
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 7.6e-13 78.6 219 26.5
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 2.2e-07 60.5 38 81.6
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.1e-06 58.2 39 66.7


User provided reference genes

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