Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.1e-173 613.2 329 100.0
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 5.6e-120 434.9 327 71.3
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 8.7e-113 411.0 327 68.8
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.4e-110 402.9 329 69.0
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.2e-110 401.7 326 67.2
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 5.8e-109 398.3 329 67.8
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 7.6e-109 397.9 324 68.5
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 8.4e-108 394.4 329 67.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.1e-107 394.0 329 68.7
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.9e-107 393.3 332 66.0
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 1.6e-106 390.2 356 61.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 2.1e-106 389.8 329 66.6
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.1e-106 389.8 320 67.8
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.7e-105 386.7 326 66.0
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 2.3e-105 386.3 327 67.0
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 3.0e-105 386.0 326 66.9
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 3.0e-105 386.0 318 67.0
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 3.9e-105 385.6 326 66.9
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 3.9e-105 385.6 353 62.0
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.6e-105 384.8 326 66.6
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.1e-104 384.0 329 66.3
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.3e-104 382.5 329 65.3
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.3e-103 380.6 324 63.6
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 6.2e-103 378.3 353 60.9
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.1e-102 377.5 327 61.5
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 1.4e-102 377.1 332 64.5
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 1.8e-102 376.7 332 63.9
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 5.3e-102 375.2 340 55.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.5e-101 373.6 327 64.2
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.0e-101 373.2 342 60.8
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 5.8e-101 371.7 332 65.1
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 1.1e-99 367.5 334 62.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 5.4e-99 365.2 329 62.6
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.2e-98 364.0 331 64.4
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 2.7e-98 362.8 330 63.0
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.5e-98 362.5 331 64.0
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 3.5e-98 362.5 327 59.9
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 6.0e-98 361.7 331 64.7
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 2.3e-97 359.8 332 63.3
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 3.3e-96 355.9 328 62.2
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 3.3e-96 355.9 323 62.2
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.3e-96 355.5 321 62.3
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 4.3e-96 355.5 331 62.8
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 5.6e-96 355.1 331 61.6
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 7.4e-96 354.8 323 61.6
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.3e-95 354.0 327 62.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.6e-95 353.6 319 61.8
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.6e-95 353.6 329 62.6
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 4.8e-95 352.1 328 62.5
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 6.2e-95 351.7 319 63.6
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 8.1e-95 351.3 329 61.1
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-94 350.9 327 62.4
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 5.3e-94 348.6 328 59.5
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 6.9e-94 348.2 328 60.7
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 9.0e-94 347.8 325 60.6
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.5e-93 347.1 329 60.5
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 5.8e-93 345.1 323 63.8
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 5.8e-93 345.1 315 62.5
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 4.9e-92 342.0 323 60.7
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 4.9e-92 342.0 327 60.9
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 8.4e-92 341.3 327 59.9
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 1.1e-91 340.9 327 61.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.4e-91 340.5 330 57.6
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 4.2e-91 339.0 330 60.6
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 4.2e-91 339.0 330 60.6
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 4.2e-91 339.0 329 60.8
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 9.3e-91 337.8 329 59.6
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.1e-90 336.7 318 55.0
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.0e-89 334.3 316 63.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.8e-89 333.6 327 59.0
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 3.0e-89 332.8 324 59.3
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 3.9e-89 332.4 324 58.6
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 1.1e-86 324.3 327 56.6
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 3.1e-86 322.8 338 57.1
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 2.6e-85 319.7 333 56.2
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 3.4e-85 319.3 316 60.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 1.7e-84 317.0 326 57.4
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 6.5e-84 315.1 327 56.9
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.4e-83 313.9 327 54.7
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.2e-82 310.8 300 61.7
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.6e-82 310.5 324 57.1
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 2.7e-82 309.7 324 57.1
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 7.9e-82 308.1 337 54.9
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 1.8e-81 307.0 318 55.3
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 3.0e-81 306.2 328 56.7
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 3.0e-81 306.2 324 56.5
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.1e-80 304.3 328 56.4
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.9e-80 303.5 328 57.0
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.9e-80 303.5 328 57.0
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 3.3e-80 302.8 327 48.3
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 6.3e-79 298.5 312 56.4
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.6e-74 282.3 334 44.6
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 3.0e-73 279.6 279 62.0
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 9.7e-72 274.6 328 51.5
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.8e-71 273.1 310 54.8
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.3e-71 271.9 210 61.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.6e-69 266.5 210 61.0
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 9.4e-67 258.1 216 57.4
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.7e-66 256.5 329 50.2
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 1.5e-64 250.8 317 48.3
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 9.7e-64 248.1 165 69.1
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.3e-63 247.7 211 57.8
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.2e-63 246.9 256 49.2
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.2e-63 245.0 214 53.7
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 4.1e-62 242.7 316 48.4
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 7.0e-62 241.9 217 52.5
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.6e-56 223.4 234 48.7
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.2e-55 220.3 211 52.6
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.2e-53 214.5 166 60.2
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.6e-53 213.4 162 60.5
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.8e-49 200.7 167 59.3
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 8.8e-49 198.4 186 52.2
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 5.7e-48 195.7 212 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.6e-37 161.0 210 52.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.1e-35 154.8 253 32.4
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.3e-33 147.1 112 58.0
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.4e-30 137.9 127 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 4.5e-29 132.9 230 33.5
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.0e-28 131.7 351 33.6
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.1e-27 128.3 355 31.5
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.9e-27 127.5 88 65.9
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.6e-24 117.1 80 67.5
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 8.3e-23 112.1 79 68.4
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 1.6e-21 107.8 69 71.0
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 1.7e-20 104.4 253 37.9
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 3.9e-20 103.2 70 65.7
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 6.6e-12 75.9 283 32.5
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.9e-11 74.3 58 60.3
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.9e-11 74.3 48 66.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 3.3e-11 73.6 125 36.8
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 1.4e-09 68.2 197 31.0
SGA_v2.0_scaffold28G11802 Striga asiatica HOM05D005795 ORTHO05D007200 1.4e-09 68.2 238 21.4
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 4.4e-08 63.2 203 35.0
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 5.8e-08 62.8 183 34.4
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 7.5e-08 62.4 184 31.0
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.7e-07 60.1 212 23.6
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 3.7e-07 60.1 272 32.7
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.1e-06 58.5 183 26.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 1.4e-06 58.2 56 50.0
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 7.1e-06 55.8 155 37.4


User provided reference genes

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