Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 2.6e-85 318.9 191 100.0
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 7.7e-29 131.3 174 48.3
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 3.2e-27 125.9 164 48.8
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 4.2e-27 125.6 182 45.1
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 8.8e-25 117.9 158 46.2
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 1.3e-23 114.0 174 46.0
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 4.8e-23 112.1 180 45.6
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 1.4e-22 110.5 190 41.1
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 1.8e-22 110.2 175 46.9
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.4e-22 109.8 186 40.3
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.4e-22 109.8 191 42.9
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 9.1e-22 107.8 186 40.3
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 1.2e-21 107.5 157 48.4
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 2.6e-21 106.3 178 43.8
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 3.5e-21 105.9 188 42.0
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 3.8e-20 102.4 171 46.8
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 3.2e-19 99.4 160 43.8
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 9.4e-19 97.8 160 43.8
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 3.6e-18 95.9 158 47.5
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 6.1e-18 95.1 160 40.0
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 1.0e-17 94.4 156 39.7
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 1.0e-17 94.4 156 41.7
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 1.0e-17 94.4 156 41.7
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 1.0e-17 94.4 175 41.7
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 1.8e-17 93.6 156 50.0
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 5.2e-17 92.0 172 44.2
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 1.2e-16 90.9 156 42.3
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 1.5e-16 90.5 173 41.0
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 9.7e-16 87.8 161 41.0
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 1.3e-15 87.4 156 39.7
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 1.3e-15 87.4 168 47.6
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 1.7e-15 87.0 172 38.4
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 2.2e-15 86.7 173 39.3
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 2.8e-15 86.3 163 42.9
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 6.3e-15 85.1 165 37.6
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 1.4e-14 84.0 156 38.5
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 1.8e-14 83.6 161 37.9
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 2.4e-14 83.2 155 45.2
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 3.1e-14 82.8 162 35.8
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 4.1e-14 82.4 174 42.5
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 9.1e-14 81.3 183 37.2
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 9.1e-14 81.3 191 35.1
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 1.2e-13 80.9 144 40.3
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 1.6e-13 80.5 169 39.1
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 2.7e-13 79.7 170 38.8
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 4.5e-13 79.0 162 37.0
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 4.5e-13 79.0 179 36.9
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 1.0e-12 77.8 161 40.4
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 2.9e-12 76.3 166 38.0
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 3.8e-12 75.9 185 35.7
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 3.8e-12 75.9 155 42.6
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 8.5e-12 74.7 172 38.4
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 8.5e-12 74.7 167 38.9
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 1.5e-11 73.9 170 36.5
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 3.2e-11 72.8 178 36.0
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.2e-11 72.4 154 39.6
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 7.2e-11 71.6 167 37.7
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.2e-10 70.9 191 35.1
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 2.1e-10 70.1 166 35.5
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.7e-10 69.7 154 38.3
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 2.7e-10 69.7 172 34.3
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.7e-10 68.9 154 37.7
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 6.1e-10 68.6 173 34.7
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 8.0e-10 68.2 160 34.4
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 1.4e-09 67.4 176 34.7
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.3e-09 66.6 154 39.6
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 2.6e-08 63.2 161 34.8
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 2.6e-08 63.2 163 33.7
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 2.6e-08 63.2 160 36.9
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 3.4e-08 62.8 156 34.0
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 5.7e-08 62.0 159 32.1
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 1.3e-07 60.8 146 40.4
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 1.7e-07 60.5 197 33.5
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 1.7e-07 60.5 173 30.6
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 1.8e-06 57.0 147 40.8
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 1.8e-06 57.0 166 32.5
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 5.4e-06 55.5 153 35.9
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 9.1e-06 54.7 133 36.8


User provided reference genes

Program Settings