Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 8.5e-148 526.9 258 100.0
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 5.6e-107 391.3 255 75.3
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.2e-106 390.2 244 76.2
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.6e-106 389.8 258 72.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.1e-106 389.4 258 72.9
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.1e-106 389.4 258 73.6
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.8e-106 389.0 272 71.7
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 4.7e-106 388.3 244 75.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 6.2e-106 387.9 256 73.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.4e-105 386.7 248 76.2
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 1.8e-105 386.3 256 74.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 1.5e-104 383.3 259 72.6
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.7e-103 378.6 231 76.6
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.4e-102 376.7 258 72.1
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 2.4e-102 375.9 246 72.0
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.2e-102 375.6 256 71.9
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 9.2e-102 374.0 252 71.0
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.6e-101 373.2 227 76.7
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 2.7e-101 372.5 280 66.1
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 3.5e-101 372.1 240 75.0
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 4.6e-101 371.7 252 69.0
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 6.0e-101 371.3 228 75.4
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.8e-101 370.9 240 74.6
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.3e-100 370.2 230 74.3
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.7e-100 369.8 253 69.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.3e-100 369.4 259 70.3
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 2.3e-100 369.4 225 74.2
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.0e-100 369.0 270 69.3
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 3.0e-100 369.0 234 75.6
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.9e-100 368.6 225 76.4
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 6.6e-100 367.9 252 70.6
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 8.6e-100 367.5 248 73.0
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 8.6e-100 367.5 244 71.3
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 8.6e-100 367.5 240 73.8
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.1e-99 367.1 258 69.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.1e-99 367.1 252 69.4
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.1e-99 367.1 229 75.5
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 1.9e-99 366.3 259 69.1
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 3.3e-99 365.5 258 70.5
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 5.6e-99 364.8 255 71.0
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 7.3e-99 364.4 224 75.9
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 7.3e-99 364.4 224 75.9
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.2e-98 363.6 231 75.3
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.6e-98 363.2 255 69.8
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-98 363.2 258 70.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.6e-98 363.2 250 71.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.1e-98 362.8 222 77.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.8e-98 362.5 224 75.4
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 2.8e-98 362.5 231 75.3
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.8e-98 362.5 226 75.7
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 6.2e-98 361.3 234 74.8
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 8.1e-98 360.9 223 75.3
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.4e-97 360.1 227 73.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.4e-97 360.1 258 69.0
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 3.1e-97 359.0 217 77.0
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 4.0e-97 358.6 255 70.6
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 4.0e-97 358.6 249 70.7
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 5.2e-97 358.2 258 69.4
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 5.8e-96 354.8 250 71.2
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 9.8e-96 354.0 256 66.8
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.9e-95 352.4 225 74.7
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.7e-95 352.1 250 68.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.7e-95 352.1 217 77.0
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 4.9e-95 351.7 230 73.0
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 6.4e-95 351.3 217 75.6
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 8.3e-95 350.9 252 67.9
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 8.3e-95 350.9 220 76.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 1.1e-94 350.5 202 78.2
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.1e-94 350.5 230 71.7
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.1e-94 350.5 228 71.9
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.4e-94 350.1 228 72.4
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.4e-94 350.1 221 73.3
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.9e-94 349.7 250 68.0
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.9e-94 349.7 214 75.2
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.2e-94 349.0 228 70.6
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 4.1e-94 348.6 252 68.3
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.4e-94 348.2 258 65.9
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.1e-94 347.8 221 72.4
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 2.1e-93 346.3 230 69.1
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 2.1e-93 346.3 230 69.1
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.7e-93 345.9 221 72.4
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 6.0e-93 344.7 221 71.9
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.3e-92 343.6 257 66.1
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.7e-92 343.2 249 66.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 3.0e-92 342.4 237 68.4
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 6.6e-92 341.3 249 66.3
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 6.6e-92 341.3 227 70.5
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.5e-91 340.1 225 71.6
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.9e-91 339.7 250 66.0
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 3.3e-91 339.0 232 70.3
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 4.3e-91 338.6 228 70.2
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 4.3e-91 338.6 229 70.7
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 9.5e-91 337.4 238 70.2
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.3e-87 327.0 299 56.9
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.2e-87 326.2 348 50.9
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 6.4e-87 324.7 234 66.7
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 7.8e-85 317.8 225 67.6
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 8.9e-81 304.3 200 71.0
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.1e-78 297.4 206 73.3
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 7.1e-78 294.7 178 78.1
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 1.6e-77 293.5 205 69.8
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 8.7e-76 287.7 207 69.1
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.8e-72 275.0 219 61.2
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.6e-69 266.9 227 58.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 9.0e-65 251.1 229 52.8
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 8.4e-63 244.6 232 51.3
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 5.3e-57 225.3 141 75.2
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 2.7e-53 213.0 176 61.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 3.2e-46 189.5 101 84.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.8e-44 183.7 125 70.4
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 5.3e-41 172.2 230 42.2
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 6.5e-39 165.2 111 75.7
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.2e-38 162.9 210 43.3
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.2e-37 161.0 210 43.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 4.3e-35 152.5 213 41.8
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.8e-33 147.1 125 62.4
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 9.1e-33 144.8 90 74.4
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 7.7e-32 141.7 109 62.4
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.0e-31 141.4 98 72.4
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.0e-31 141.4 98 72.4
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 3.3e-27 126.3 118 56.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 2.2e-26 123.6 130 53.1
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 2.2e-26 123.6 130 53.1
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.6e-24 117.5 79 70.9
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.5e-22 110.9 84 65.5
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.7e-21 106.7 62 74.2
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.0e-20 104.8 190 35.8
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 5.2e-20 102.4 99 56.6
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 8.2e-18 95.1 55 76.4
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 3.5e-16 89.7 171 33.9
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 7.2e-14 82.0 180 32.2
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 1.6e-13 80.9 59 64.4
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.2e-11 74.7 71 59.2
Cre17.g711200 Chlamydomonas reinhardtii HOM05D002689 ORTHO05D003129 5.5e-06 55.8 201 24.9


User provided reference genes

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