Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.1e-63 246.5 133 100.0
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 4.1e-37 158.3 122 63.9
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.2e-36 156.8 123 66.7
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.9e-35 152.1 120 64.2
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 6.5e-35 151.0 121 62.8
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 6.5e-35 151.0 121 62.8
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 6.5e-35 151.0 121 62.8
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 8.5e-35 150.6 131 59.5
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.5e-34 149.8 121 62.8
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.2e-33 146.7 133 58.6
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 2.7e-33 145.6 121 62.0
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.6e-33 145.2 124 57.3
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 3.6e-33 145.2 124 57.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.6e-33 145.2 124 60.5
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.6e-33 145.2 124 59.7
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 3.6e-33 145.2 130 56.9
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 4.7e-33 144.8 135 55.6
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 1.0e-32 143.7 135 54.8
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.4e-32 143.3 124 59.7
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 1.8e-32 142.9 124 57.3
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 3.0e-32 142.1 122 58.2
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 3.0e-32 142.1 124 57.3
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 4.0e-32 141.7 121 60.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 1.5e-31 139.8 134 58.2
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 5.7e-31 137.9 124 56.5
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 5.7e-31 137.9 133 56.4
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 7.5e-31 137.5 123 58.5
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 7.5e-31 137.5 102 66.7
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.2e-30 136.0 123 57.7
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.2e-30 136.0 133 54.1
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.8e-30 135.6 116 60.3
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 3.7e-30 135.2 123 57.7
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 6.3e-30 134.4 134 55.2
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.1e-29 133.7 124 57.3
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.1e-29 133.7 123 56.9
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-29 132.9 116 58.6
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.4e-29 132.5 120 60.0
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 5.3e-29 131.3 146 51.4
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 7.0e-29 131.0 119 52.9
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.6e-28 129.8 116 56.9
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 3.5e-28 128.6 117 54.7
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 3.5e-28 128.6 142 51.4
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 5.9e-28 127.9 128 57.8
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 5.9e-28 127.9 131 52.7
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 7.7e-28 127.5 136 54.4
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.0e-27 127.1 116 53.4
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.2e-25 120.2 128 51.6
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.1e-25 119.4 128 51.6
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.7e-25 119.0 128 51.6
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.7e-25 119.0 120 49.2
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 3.6e-25 118.6 132 49.2
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 3.6e-25 118.6 127 51.2
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 6.1e-25 117.9 135 50.4
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 6.1e-25 117.9 127 51.2
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 8.0e-25 117.5 128 49.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 8.0e-25 117.5 128 50.8
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.4e-24 116.7 132 47.7
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.4e-24 116.7 126 50.0
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 1.4e-24 116.7 120 55.0
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 2.3e-24 115.9 127 50.4
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.3e-24 115.9 109 53.2
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 4.0e-24 115.2 127 48.8
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 4.0e-24 115.2 120 54.2
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.2e-24 114.8 129 51.9
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 6.8e-24 114.4 129 51.9
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 8.8e-24 114.0 131 50.4
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 1.2e-23 113.6 128 52.3
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.5e-23 113.2 126 49.2
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.5e-23 113.2 135 50.4
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 2.0e-23 112.8 132 48.5
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 2.6e-23 112.5 128 51.6
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 2.6e-23 112.5 132 47.7
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.6e-23 112.5 137 48.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 4.4e-23 111.7 117 52.1
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 4.4e-23 111.7 127 46.5
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 7.5e-23 110.9 112 50.0
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 9.8e-23 110.5 100 53.0
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 9.8e-23 110.5 100 60.0
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.3e-22 110.2 138 48.6
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 1.1e-21 107.1 134 51.5
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 3.1e-21 105.5 85 63.5
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.0e-20 102.8 104 51.0
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 2.3e-19 99.4 119 51.3
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.9e-19 99.0 78 64.1
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.9e-19 99.0 124 49.2
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 3.8e-19 98.6 116 46.6
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 7.2e-18 94.4 118 45.8
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 9.5e-18 94.0 130 44.6
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 9.5e-18 94.0 130 44.6
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.6e-17 93.2 83 61.4
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 3.6e-17 92.0 125 42.4
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 4.7e-17 91.7 121 42.1
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.0e-16 90.5 90 54.4
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 4.0e-16 88.6 129 41.1
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 9.8e-15 84.0 125 40.0
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 2.2e-14 82.8 143 35.7
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 3.7e-14 82.0 115 44.3
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.7e-14 82.0 127 40.2
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 6.3e-14 81.3 127 39.4
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 1.4e-13 80.1 98 46.9
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 3.2e-13 79.0 115 40.0
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 2.7e-12 75.9 71 50.7
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.3e-11 73.6 133 37.6
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.0e-08 62.0 62 53.2
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.5e-07 60.1 62 51.6
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.0e-07 59.7 113 35.4
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 4.4e-07 58.5 113 36.3


User provided reference genes

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