Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.9e-174 615.9 346 100.0
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 5.1e-55 219.2 402 44.0
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 1.1e-54 218.0 382 45.3
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 6.9e-52 208.8 397 43.1
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 3.2e-49 199.9 401 43.1
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.1e-48 197.2 376 44.4
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.7e-48 196.8 380 43.4
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.1e-45 187.2 364 42.9
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.2e-43 181.4 372 43.0
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 2.0e-43 180.6 401 42.1
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 5.8e-43 179.1 387 38.0
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.2e-42 177.2 346 39.0
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.4e-41 174.5 360 43.3
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 4.2e-41 172.9 393 38.2
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 6.0e-40 169.1 385 39.5
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 7.9e-40 168.7 359 39.3
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.5e-38 164.5 363 39.9
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 1.5e-38 164.5 418 38.0
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.9e-38 164.1 376 34.6
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 7.4e-38 162.2 349 38.4
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 4.8e-37 159.5 384 40.6
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.1e-36 158.3 370 38.6
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.4e-36 157.9 367 38.7
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.4e-36 157.9 367 38.7
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.4e-36 157.9 372 38.4
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.8e-36 157.5 286 39.2
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 2.4e-36 157.1 313 42.2
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 3.1e-36 156.8 353 37.1
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 6.9e-36 155.6 270 40.7
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 9.0e-36 155.2 371 38.3
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 9.0e-36 155.2 316 38.6
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.0e-35 154.1 326 40.5
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.6e-35 153.7 329 39.2
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 7.6e-35 152.1 382 37.4
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.3e-34 151.4 363 38.8
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.3e-34 151.4 377 36.9
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 2.9e-34 150.2 367 37.9
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.9e-34 150.2 385 39.5
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 3.8e-34 149.8 383 35.2
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 4.9e-34 149.4 386 35.0
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.4e-33 147.9 383 35.5
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.5e-33 147.1 363 39.7
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 3.2e-33 146.7 371 37.5
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 7.1e-33 145.6 368 38.3
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 9.3e-33 145.2 358 36.0
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 9.3e-33 145.2 372 37.4
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 9.3e-33 145.2 335 38.2
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 9.3e-33 145.2 389 35.7
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 9.3e-33 145.2 350 38.6
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.2e-32 144.8 341 37.5
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.2e-32 144.8 425 33.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.2e-32 144.8 354 36.7
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.6e-32 144.4 391 35.0
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.1e-32 144.1 396 37.4
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 3.5e-32 143.3 374 38.5
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.5e-32 143.3 354 36.7
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 3.5e-32 143.3 358 32.7
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 4.6e-32 142.9 372 38.2
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 6.0e-32 142.5 392 38.5
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 7.9e-32 142.1 431 31.8
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.0e-31 141.7 413 30.8
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.8e-31 141.0 351 36.8
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.8e-31 141.0 340 34.7
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 3.0e-31 140.2 350 39.1
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.1e-30 138.3 310 37.1
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.1e-30 138.3 340 36.5
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.1e-30 138.3 402 34.3
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 3.3e-30 136.7 377 33.7
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 3.3e-30 136.7 378 37.3
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 3.3e-30 136.7 245 39.6
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 5.6e-30 136.0 419 36.3
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.3e-29 134.8 373 38.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.7e-29 133.3 343 36.7
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 4.8e-29 132.9 429 36.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 6.2e-29 132.5 355 33.2
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-28 131.7 377 39.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 1.1e-28 131.7 376 33.8
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.4e-28 131.3 362 32.9
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 1.4e-28 131.3 419 34.6
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 1.8e-28 131.0 372 33.3
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.8e-28 131.0 378 37.0
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 2.4e-28 130.6 384 38.3
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 3.1e-28 130.2 345 38.0
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 3.1e-28 130.2 359 35.9
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 6.9e-28 129.0 363 38.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 6.9e-28 129.0 389 32.4
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 9.0e-28 128.6 386 37.8
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 9.0e-28 128.6 265 40.4
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.5e-27 127.9 369 37.1
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 4.5e-27 126.3 383 36.3
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 4.5e-27 126.3 292 34.6
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 5.8e-27 125.9 367 34.1
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 5.8e-27 125.9 367 38.1
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.9e-26 123.6 337 38.6
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 4.9e-26 122.9 342 38.6
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 8.4e-26 122.1 304 39.8
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.2e-25 119.8 318 31.8
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 7.1e-25 119.0 364 34.3
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.2e-24 118.2 92 62.0
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 3.5e-24 116.7 212 37.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 4.6e-24 116.3 282 38.7
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 6.0e-24 115.9 258 45.0
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 2.3e-23 114.0 344 34.6
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.9e-23 113.2 111 57.7
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.5e-22 111.3 265 43.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.5e-22 111.3 83 66.3
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.3e-22 110.2 178 44.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.7e-22 109.4 337 35.9
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 2.2e-21 107.5 342 37.7
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.8e-21 107.1 90 60.0
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.0e-19 100.9 190 37.4
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 8.5e-18 95.5 168 39.9
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.8e-12 77.8 163 39.3
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.4e-12 77.4 338 32.5
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 3.4e-11 73.6 46 71.7
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 7.7e-11 72.4 79 54.4
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 7.7e-11 72.4 312 32.7
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.8e-10 70.1 51 60.8
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.5e-09 66.2 53 60.4
FAN12G0946 Fragaria x ananassa HOM05D005773 ORTHO05D046089 7.9e-08 62.4 170 35.3
FvH4_4g21660 Fragaria vesca HOM05D005773 ORTHO05D046089 1.4e-07 61.6 173 35.8
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 3.9e-07 60.1 99 38.4
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 1.5e-06 58.2 44 56.8


User provided reference genes

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