Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.8e-133 479.2 231 100.0
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 4.8e-94 348.2 231 71.4
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 9.1e-93 344.0 231 70.1
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 9.1e-93 344.0 228 70.2
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-91 340.1 230 70.0
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 3.2e-90 335.5 232 69.8
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 3.2e-90 335.5 227 68.7
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 4.2e-90 335.1 227 68.3
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 5.5e-90 334.7 227 69.6
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.2e-89 333.6 226 69.0
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 3.6e-89 332.0 226 68.6
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 8.0e-89 330.9 231 70.1
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.3e-88 329.3 215 71.6
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 3.0e-88 328.9 218 69.7
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 5.2e-88 328.2 222 69.8
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 6.8e-88 327.8 237 68.4
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.2e-87 327.0 215 71.6
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.2e-87 327.0 214 72.4
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 2.0e-87 326.2 216 69.9
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 2.6e-87 325.9 223 67.7
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 2.6e-87 325.9 211 71.6
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 2.6e-87 325.9 210 71.9
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 5.7e-87 324.7 214 72.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 9.8e-87 323.9 229 65.9
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.3e-86 323.6 214 71.5
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 3.7e-86 322.0 221 69.7
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 8.3e-86 320.9 223 68.6
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 1.1e-85 320.5 227 67.0
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 2.4e-85 319.3 227 67.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 7.0e-85 317.8 214 68.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.0e-85 317.8 214 68.7
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.6e-84 316.6 224 65.6
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.7e-84 315.8 217 71.4
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.7e-84 315.8 214 68.2
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 4.5e-84 315.1 228 64.5
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 5.9e-84 314.7 219 68.9
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.3e-83 313.5 218 67.9
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.3e-83 312.8 214 67.8
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 2.3e-83 312.8 214 68.7
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 2.3e-83 312.8 212 67.0
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 8.6e-83 310.8 212 65.1
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.1e-82 310.5 204 73.5
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.5e-82 310.1 233 63.5
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.5e-82 310.1 215 67.0
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.2e-82 308.5 214 66.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 5.5e-82 308.1 225 66.7
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 5.5e-82 308.1 237 61.2
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 1.2e-81 307.0 227 64.3
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.8e-81 305.8 228 64.5
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 4.7e-81 305.1 221 65.6
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 6.1e-81 304.7 222 64.0
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 1.8e-80 303.1 237 61.2
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 3.0e-80 302.4 214 67.3
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 3.0e-80 302.4 229 64.6
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 1.5e-79 300.1 219 64.4
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 2.0e-79 299.7 212 67.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.4e-79 298.9 218 62.8
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 7.5e-79 297.7 214 64.5
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.3e-78 297.0 222 62.2
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.3e-78 297.0 222 62.2
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.3e-78 297.0 222 62.2
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.3e-78 297.0 222 62.2
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 1.7e-78 296.6 212 63.7
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 2.8e-78 295.8 218 62.8
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 2.8e-78 295.8 213 65.3
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 1.4e-77 293.5 218 62.4
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 1.4e-77 293.5 221 61.5
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.4e-77 293.5 196 70.9
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 3.1e-77 292.4 223 61.0
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 3.1e-77 292.4 228 61.4
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 4.1e-77 292.0 222 60.8
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 7.0e-77 291.2 218 61.9
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.6e-76 290.0 222 59.9
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.6e-76 290.0 228 61.4
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 2.0e-76 289.7 231 60.6
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 5.9e-76 288.1 213 64.3
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 7.8e-76 287.7 221 59.7
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 7.8e-76 287.7 227 61.7
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.3e-75 287.0 215 64.2
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.7e-75 286.6 223 60.1
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 2.5e-74 282.7 232 60.3
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.8e-73 279.3 215 60.0
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.4e-72 276.9 216 58.8
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.8e-72 276.6 210 62.4
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.2e-71 273.9 198 65.2
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.6e-71 272.7 212 60.8
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 3.4e-71 272.3 222 58.6
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 9.8e-71 270.8 210 61.0
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 6.0e-68 261.5 217 55.3
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 8.6e-67 257.7 175 68.6
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 8.6e-67 257.7 270 48.9
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 8.6e-67 257.7 251 49.8
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 3.3e-66 255.8 214 57.0
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 5.6e-66 255.0 224 55.4
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 5.8e-63 245.0 224 53.1
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 4.9e-62 241.9 213 52.6
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.1e-61 240.7 181 64.1
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 2.4e-61 239.6 220 52.7
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.2e-61 239.2 174 67.8
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.9e-59 232.3 173 66.5
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 5.6e-58 228.4 175 59.4
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.6e-57 226.9 154 70.8
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 3.6e-57 225.7 235 47.7
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 6.2e-57 224.9 218 49.1
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 8.1e-57 224.6 217 50.2
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 9.9e-55 217.6 206 53.9
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.2e-53 212.6 213 46.9
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.1e-53 211.5 205 50.2
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.7e-51 206.8 159 61.0
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 9.5e-50 201.1 214 46.7
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 2.1e-49 199.9 163 62.6
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 2.0e-47 193.4 190 52.6
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 9.9e-47 191.0 218 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.1e-45 187.6 217 43.3
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 2.4e-40 169.9 137 59.9
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.1e-40 169.5 114 69.3
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.4e-39 166.0 166 48.2
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.7e-30 137.1 220 31.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 7.9e-28 128.3 107 57.9
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 8.7e-27 124.8 91 70.3
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.8e-25 119.8 80 71.2
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 6.9e-24 115.2 223 35.0
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.9e-21 107.1 94 56.4
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 4.9e-14 82.4 53 66.0
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 2.7e-12 76.6 116 33.6
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 3.9e-11 72.8 66 54.5
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 1.4e-08 64.3 52 50.0
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 2.0e-07 60.5 43 60.5


User provided reference genes

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