Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 0.0e+00 1583.9 817 100.0
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 0.0e+00 1087.8 829 69.4
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 0.0e+00 1079.7 829 67.9
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.1e-311 1073.2 830 67.1
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.9e-311 1071.2 830 67.1
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 2.6e-307 1058.5 817 67.3
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 4.8e-306 1054.3 827 67.6
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.4e-305 1052.7 806 67.7
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.6e-304 1049.3 832 67.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.6e-301 1039.3 827 66.5
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.5e-291 1006.1 830 63.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 3.3e-286 988.4 827 62.2
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 3.4e-283 978.4 826 61.4
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.1e-281 973.4 797 63.5
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.2e-280 969.9 821 61.8
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 1.6e-277 959.5 819 61.7
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 6.8e-276 954.1 815 61.7
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.3e-274 949.9 820 60.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 4.9e-274 948.0 801 62.9
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.9e-273 946.0 829 62.1
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.4e-273 945.7 821 60.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 3.2e-273 945.3 828 61.5
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 5.4e-273 944.5 833 60.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 7.0e-273 944.1 826 61.0
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.2e-272 943.3 821 59.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.2e-272 943.3 811 62.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 1.7e-271 939.5 811 62.0
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 8.6e-271 937.2 811 61.8
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 2.5e-270 935.6 819 61.4
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 5.6e-270 934.5 809 60.1
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.5e-267 926.4 828 60.1
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.3e-266 923.3 805 60.5
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 7.1e-265 917.5 815 59.4
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 7.1e-265 917.5 805 60.2
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.6e-264 916.4 809 59.6
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 6.6e-263 911.0 806 59.8
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.6e-261 906.4 815 58.9
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 1.4e-257 893.3 805 57.5
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 4.3e-254 881.7 823 56.3
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 2.1e-253 879.4 814 58.5
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 1.4e-252 876.7 811 58.7
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.4e-252 875.9 807 57.1
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.2e-251 873.6 816 56.6
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.6e-251 872.5 807 56.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.6e-251 872.5 756 60.3
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 9.9e-251 870.5 821 56.4
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.3e-250 870.2 830 56.6
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 3.8e-250 868.6 830 56.7
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 8.4e-250 867.5 830 56.6
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.7e-248 862.4 822 56.3
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 3.0e-247 859.0 801 57.9
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.9e-246 856.3 819 55.9
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 7.3e-246 854.4 825 54.9
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.8e-245 852.4 823 56.3
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.1e-244 850.5 827 55.3
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 9.0e-244 847.4 824 56.2
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 1.2e-243 847.0 809 55.9
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 3.2e-241 839.0 795 56.5
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 6.0e-240 834.7 821 55.5
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.5e-238 829.3 822 54.0
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 5.6e-238 828.2 824 54.6
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 4.5e-235 818.5 825 54.3
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 2.9e-234 815.8 819 55.3
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 7.9e-232 807.7 835 54.4
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.3e-229 800.4 801 53.4
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.9e-226 789.3 819 53.2
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 6.7e-223 778.1 819 53.1
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.3e-221 773.9 607 65.7
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.1e-220 770.8 743 54.5
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.4e-220 770.4 743 55.2
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 2.0e-219 766.5 741 55.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 4.5e-219 765.4 827 52.8
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 3.2e-217 759.2 823 52.4
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 5.5e-217 758.4 806 52.7
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 2.1e-216 756.5 820 52.2
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 3.6e-216 755.7 835 51.1
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 4.6e-216 755.4 818 53.1
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 7.9e-216 754.6 820 51.8
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.8e-215 753.4 824 51.9
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.1e-214 750.7 823 52.1
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.3e-214 749.2 818 51.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.3e-213 747.3 817 52.5
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 1.4e-212 743.8 806 52.6
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 4.5e-211 738.8 819 51.4
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 7.7e-211 738.0 815 51.4
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 5.5e-209 731.9 819 48.7
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 1.0e-207 727.6 826 51.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 2.6e-206 723.0 652 60.6
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 4.5e-203 712.2 793 51.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 9.4e-201 704.5 612 61.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 3.5e-195 686.0 822 47.1
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 8.9e-175 618.2 552 60.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.5e-174 617.5 793 44.8
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.9e-173 613.2 738 48.5
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 7.3e-169 598.6 608 52.3
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 4.6e-163 579.3 785 42.9
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 3.0e-154 550.1 563 52.8
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 8.9e-151 538.5 482 59.5
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 2.6e-142 510.4 423 64.1
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 6.2e-136 489.2 781 38.9
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.0e-130 471.9 757 42.8
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.9e-129 467.6 520 51.0
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.1e-114 416.4 343 63.6
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 9.7e-105 385.6 300 66.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.1e-91 341.3 485 46.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.1e-87 327.0 288 59.7
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.6e-86 325.1 306 58.8
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.0e-86 324.7 911 29.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 2.5e-84 317.8 872 29.1
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.0e-74 285.8 224 67.0
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 2.7e-70 271.2 829 28.3
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.3e-69 268.9 216 65.7
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 3.6e-59 234.2 533 32.3
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.9e-56 224.6 263 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 8.6e-53 213.0 538 28.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.9e-48 198.0 580 30.0
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.8e-42 176.8 224 47.3
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.0e-21 109.8 156 42.9
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 2.1e-19 102.1 71 73.2
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 5.3e-18 97.4 494 23.1


User provided reference genes

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