Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 4.9e-162 574.3 272 100.0
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 3.5e-128 461.8 264 81.4
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 7.6e-123 444.1 269 78.1
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.8e-122 441.8 273 74.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.1e-121 440.3 273 74.7
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.4e-121 439.9 273 74.0
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 4.2e-121 438.3 273 74.7
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.2e-120 436.8 268 75.7
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.2e-120 436.8 268 75.7
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.2e-120 436.8 264 76.5
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.1e-120 436.0 263 78.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 2.1e-120 436.0 268 75.7
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 2.7e-120 435.6 268 75.4
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 4.6e-120 434.9 273 74.0
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 4.6e-120 434.9 263 76.0
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 3.9e-119 431.8 268 74.3
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 3.9e-119 431.8 269 76.2
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 8.7e-119 430.6 273 75.8
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.5e-118 429.9 273 72.2
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.5e-118 429.9 273 72.2
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.3e-117 426.8 273 72.5
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.3e-117 426.8 273 72.5
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 1.6e-117 426.4 262 75.2
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.6e-117 426.4 255 77.6
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 3.7e-117 425.2 260 75.8
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 4.8e-117 424.9 271 73.4
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.4e-116 423.3 273 72.9
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 1.8e-116 422.9 274 71.9
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.8e-116 422.9 269 73.6
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 3.1e-116 422.2 273 72.2
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.1e-116 422.2 244 77.9
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 4.1e-116 421.8 274 72.6
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 9.0e-116 420.6 273 71.8
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 1.5e-115 419.9 273 70.7
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 3.4e-115 418.7 262 74.0
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 3.4e-115 418.7 259 75.7
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 4.5e-115 418.3 273 72.2
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 5.9e-115 417.9 273 71.8
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 5.9e-115 417.9 272 71.3
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.0e-114 417.2 264 75.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 2.2e-114 416.0 273 71.1
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 2.9e-114 415.6 274 70.4
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 8.4e-114 414.1 264 72.0
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.1e-113 413.7 256 75.4
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.4e-113 413.3 274 72.6
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.9e-113 412.9 269 72.9
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 7.2e-113 411.0 272 71.7
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 7.2e-113 411.0 263 72.6
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.6e-112 409.8 273 68.9
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.7e-112 409.1 264 71.2
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.7e-112 409.1 263 72.2
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 3.5e-112 408.7 263 71.5
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 3.0e-111 405.6 267 70.0
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 6.7e-111 404.4 273 68.1
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.1e-110 403.7 264 70.1
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 5.7e-110 401.4 270 70.7
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 7.4e-110 401.0 267 71.2
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 9.7e-110 400.6 288 66.7
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 6.9e-108 394.4 269 68.0
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 6.5e-106 387.9 272 66.2
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.1e-105 387.1 284 62.7
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.2e-104 383.6 269 65.8
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 2.7e-104 382.5 274 64.6
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 1.4e-103 380.2 252 70.2
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 3.0e-103 379.0 270 64.1
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 5.1e-103 378.3 264 68.6
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.5e-102 376.7 270 63.7
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 2.5e-102 375.9 265 65.3
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 3.7e-101 372.1 244 72.5
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 4.8e-101 371.7 248 66.9
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.8e-100 369.8 253 67.6
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.7e-98 363.2 254 65.7
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.1e-97 360.5 256 67.6
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 4.2e-97 358.6 261 65.1
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.2e-96 357.1 256 66.8
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.2e-96 357.1 292 61.6
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 7.9e-96 354.4 245 69.8
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 3.0e-95 352.4 245 69.4
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 2.2e-93 346.3 222 69.8
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 1.1e-92 344.0 237 67.9
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 2.5e-89 332.8 236 63.1
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.3e-85 320.5 194 74.2
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 3.1e-84 315.8 233 64.4
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 1.6e-83 313.5 228 62.7
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.9e-82 309.3 193 72.5
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 8.5e-82 307.8 175 79.4
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.3e-77 293.9 182 71.4
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 1.7e-77 293.5 237 56.1
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 1.5e-73 280.4 266 47.0
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 5.5e-73 278.5 267 53.6
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.2e-72 277.3 234 49.6
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 4.4e-70 268.9 186 70.4
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 8.0e-64 248.1 159 73.0
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 6.6e-58 228.4 150 72.0
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 6.2e-56 221.9 149 67.8
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 8.3e-53 211.5 161 57.1
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 4.1e-52 209.1 144 67.4
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 7.0e-52 208.4 111 85.6
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 8.6e-50 201.4 139 69.8
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 3.3e-49 199.5 151 64.9
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.3e-49 199.1 131 73.3
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.3e-49 199.1 131 73.3
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.7e-48 195.7 129 66.7
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 5.4e-44 182.2 150 60.0
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 2.4e-36 156.8 245 34.7
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.7e-34 150.6 103 67.0
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 2.4e-28 130.2 250 39.6
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 2.4e-28 130.2 164 43.9
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 3.0e-26 123.2 95 62.1
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 1.9e-25 120.6 111 53.2
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 4.3e-25 119.4 70 77.1
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 9.3e-20 101.7 68 66.2
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.1e-16 90.5 51 78.4
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.2e-14 84.7 44 84.1
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.2e-14 84.7 44 84.1
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 1.1e-12 78.2 58 62.1
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 4.2e-12 76.3 146 30.8
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 2.7e-11 73.6 43 79.1
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 7.4e-09 65.5 51 58.8
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 7.4e-09 65.5 51 58.8
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.3e-08 64.7 38 73.7
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.3e-08 64.7 38 73.7
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 6.2e-08 62.4 36 69.4
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.0e-07 59.7 75 42.7
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 4.0e-07 59.7 75 42.7
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 7.6e-06 55.5 38 68.4


User provided reference genes

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