Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 2.7e-31 138.7 106 100.0
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 1.0e-27 126.7 106 92.5
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.2e-10 70.1 104 42.3
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 1.2e-10 70.1 104 42.3
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 3.4e-10 68.6 104 41.3
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 7.6e-10 67.4 110 64.5
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 2.2e-09 65.9 104 60.6
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 6.4e-09 64.3 101 40.6
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.9e-08 62.8 104 38.5
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 2.4e-08 62.4 98 40.8
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 5.4e-08 61.2 40 75.0
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 7.1e-08 60.8 112 38.4
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 1.2e-07 60.1 104 59.6
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 1.6e-07 59.7 104 37.5
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 2.1e-07 59.3 42 64.3
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 2.1e-07 59.3 101 40.6
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.1e-07 59.3 109 37.6
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 2.7e-07 58.9 101 62.4
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.7e-07 58.9 104 37.5
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 2.7e-07 58.9 103 37.9
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 3.5e-07 58.5 104 36.5
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.6e-07 58.2 104 37.5
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 4.6e-07 58.2 42 64.3
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 4.6e-07 58.2 87 44.8
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 7.8e-07 57.4 101 35.6
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 1.0e-06 57.0 101 39.6
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 1.3e-06 56.6 104 39.4
HPP92_007287 Vanilla planifolia HOM05D005842 ORTHO05D007077 1.3e-06 56.6 41 65.9
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 2.3e-06 55.8 104 59.6
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.3e-06 55.8 104 37.5
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 3.0e-06 55.5 42 59.5
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 3.0e-06 55.5 43 58.1
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 3.9e-06 55.1 103 36.9
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 3.9e-06 55.1 104 37.5
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 3.9e-06 55.1 98 40.8
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 5.1e-06 54.7 41 63.4
Duzib151G0923 Durio zibethinus HOM05D005842 ORTHO05D007077 5.1e-06 54.7 35 74.3
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 5.1e-06 54.7 41 61.0
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 6.6e-06 54.3 104 37.5
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 8.6e-06 53.9 43 55.8


User provided reference genes

Program Settings