Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 5.6e-192 674.1 336 100.0
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 8.3e-119 431.0 305 68.5
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 7.7e-117 424.5 304 66.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.0e-116 424.1 304 67.1
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 8.5e-116 421.0 305 68.2
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 5.7e-112 408.3 305 66.2
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 3.7e-111 405.6 315 64.8
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 8.3e-111 404.4 299 67.2
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 1.6e-109 400.2 313 64.2
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.0e-108 397.5 311 64.3
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 2.3e-108 396.4 305 64.3
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 5.0e-108 395.2 315 61.9
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 6.6e-108 394.8 295 67.1
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 3.6e-106 389.0 306 63.7
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 6.8e-105 384.8 311 63.3
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.8e-105 384.8 311 63.3
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 1.7e-103 380.2 306 64.1
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.8e-103 379.4 305 63.0
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 8.3e-103 377.9 301 61.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.1e-102 377.5 308 61.4
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 2.7e-101 372.9 308 60.7
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 5.9e-101 371.7 300 62.7
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 1.5e-99 367.1 307 59.0
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.9e-99 366.7 308 60.1
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 1.9e-99 366.7 305 59.0
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 5.6e-99 365.2 301 61.8
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 5.6e-99 365.2 307 60.6
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 9.5e-99 364.4 329 57.1
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 9.5e-99 364.4 305 58.7
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 9.5e-99 364.4 301 59.8
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 4.7e-98 362.1 314 58.6
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 6.1e-98 361.7 305 60.0
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 6.8e-97 358.2 305 58.4
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 6.8e-97 358.2 296 60.8
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 5.8e-96 355.1 304 59.2
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.2e-95 353.2 305 57.4
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 3.7e-95 352.4 308 58.8
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 4.9e-95 352.1 300 60.3
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 8.3e-95 351.3 304 58.9
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 2.4e-94 349.7 305 57.4
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.2e-93 347.4 305 55.4
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 7.8e-93 344.7 305 57.7
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 7.8e-93 344.7 305 57.0
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.3e-92 344.0 305 58.0
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.0e-92 342.8 300 57.3
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 5.0e-92 342.0 305 57.0
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 8.6e-92 341.3 314 54.1
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.1e-91 340.9 305 56.4
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.5e-91 340.5 277 61.7
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 3.3e-91 339.3 305 57.4
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 5.6e-91 338.6 305 56.1
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 9.5e-91 337.8 302 57.0
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.4e-89 334.0 301 56.1
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.8e-89 333.6 337 52.2
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 4.0e-89 332.4 305 56.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 5.2e-89 332.0 305 54.4
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 6.8e-89 331.6 305 55.1
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-88 330.9 305 56.4
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 1.2e-88 330.9 305 56.4
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.5e-88 330.5 302 56.6
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 2.6e-88 329.7 305 56.1
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.6e-88 329.7 337 51.9
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.4e-88 329.3 305 53.8
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 7.5e-88 328.2 305 54.4
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 9.8e-88 327.8 305 53.8
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 9.8e-88 327.8 307 55.4
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 1.3e-87 327.4 308 53.2
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 1.7e-87 327.0 305 53.1
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.7e-87 327.0 306 55.2
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 3.7e-87 325.9 306 55.2
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 6.4e-87 325.1 305 55.7
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.4e-86 323.9 305 54.4
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.9e-86 323.6 305 56.1
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.9e-86 323.6 313 53.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-86 323.2 307 53.7
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 3.2e-86 322.8 305 53.8
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.1e-86 322.4 305 54.8
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 5.4e-86 322.0 303 53.1
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 5.4e-86 322.0 304 53.6
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 9.2e-86 321.2 305 55.4
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 9.2e-86 321.2 305 53.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 6.0e-85 318.5 302 52.6
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.3e-84 316.6 294 56.5
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 6.6e-84 315.1 302 52.3
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.5e-83 313.9 305 54.1
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 4.3e-83 312.4 307 53.4
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 8.1e-82 308.1 305 53.4
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.8e-81 307.0 305 51.1
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.2e-81 305.4 302 53.3
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 3.7e-79 299.3 306 52.9
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 8.6e-76 288.1 314 48.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.5e-75 287.3 314 48.4
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.2e-74 284.3 306 50.7
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 4.0e-73 279.3 273 52.0
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 6.8e-73 278.5 210 66.7
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 9.9e-72 274.6 269 52.0
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 8.7e-68 261.5 238 57.1
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 9.6e-67 258.1 309 45.6
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-61 241.1 306 48.0
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.5e-61 239.6 206 60.7
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.7e-60 235.0 202 59.9
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 3.4e-56 223.0 272 46.7
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.2e-54 216.1 171 63.2
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.0e-47 194.9 254 40.6
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.0e-39 168.3 193 48.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 6.7e-36 155.6 105 70.5
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.9e-35 154.1 308 33.8
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.6e-29 134.4 217 36.4
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 3.6e-29 133.3 120 55.8
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 2.8e-26 123.6 120 46.7
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-24 117.9 139 46.0
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 4.5e-24 116.3 103 57.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 1.0e-23 115.2 120 46.7
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-23 114.8 139 44.6
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.7e-23 114.4 139 43.9
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 6.1e-21 105.9 120 45.8
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.0e-20 105.1 70 68.6
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 2.3e-20 104.0 69 69.6
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.0e-20 103.6 287 28.2
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-19 100.9 120 44.2
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 5.7e-19 99.4 142 41.5
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 4.1e-17 93.2 70 64.3
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 2.0e-16 90.9 245 33.1
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 1.8e-12 77.8 64 51.6
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 8.8e-12 75.5 117 37.6
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 1.6e-08 64.7 89 42.7


User provided reference genes

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