Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 6.9e-167 590.5 285 100.0
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 8.0e-107 391.0 280 67.5
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 3.7e-104 382.1 271 70.1
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 8.3e-104 380.9 276 69.2
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 2.7e-102 375.9 280 64.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 6.6e-101 371.3 276 64.1
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.5e-100 370.2 291 64.6
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 2.5e-100 369.4 280 65.7
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 3.3e-100 369.0 281 65.5
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 4.3e-100 368.6 275 66.9
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 5.6e-100 368.2 279 64.5
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.6e-99 366.7 278 64.4
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 2.1e-99 366.3 280 65.4
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 4.7e-99 365.2 278 65.1
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 4.7e-99 365.2 278 64.0
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 8.0e-99 364.4 280 65.7
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 1.8e-98 363.2 278 63.3
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 2.3e-98 362.8 277 65.7
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 2.2e-96 356.3 278 62.9
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 2.9e-96 355.9 284 62.0
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 4.9e-96 355.1 279 62.4
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 6.4e-96 354.8 284 63.4
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 3.2e-95 352.4 279 62.4
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 3.2e-95 352.4 280 63.2
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 2.1e-94 349.7 278 61.2
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 6.0e-94 348.2 279 61.3
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 6.0e-94 348.2 279 61.3
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 1.0e-93 347.4 280 62.1
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 2.3e-93 346.3 281 59.8
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 2.3e-93 346.3 285 59.3
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 3.0e-93 345.9 276 62.3
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 5.0e-93 345.1 280 62.1
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 6.6e-93 344.7 278 59.4
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 6.6e-93 344.7 276 61.2
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.5e-92 343.6 278 61.9
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 2.5e-92 342.8 279 58.1
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 4.3e-92 342.0 280 61.8
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 5.6e-92 341.7 279 60.2
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 5.6e-92 341.7 279 61.3
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 9.5e-92 340.9 243 66.3
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.2e-91 340.5 279 61.6
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.6e-91 340.1 274 60.6
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 2.1e-91 339.7 244 65.6
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 6.2e-91 338.2 278 62.2
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 6.2e-91 338.2 284 57.0
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 1.4e-90 337.0 280 58.6
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.4e-90 337.0 274 59.9
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 3.1e-90 335.9 279 57.3
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 4.0e-90 335.5 281 58.7
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 2.0e-89 333.2 273 60.1
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.6e-89 332.8 278 59.7
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 3.4e-89 332.4 276 59.8
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 3.4e-89 332.4 318 55.7
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 5.8e-89 331.6 287 58.2
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 9.9e-89 330.9 279 56.6
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.7e-88 330.1 280 60.4
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 1.7e-88 330.1 281 57.7
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 2.9e-88 329.3 275 58.5
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 2.9e-88 329.3 275 57.1
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 4.9e-88 328.6 280 58.2
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 6.4e-88 328.2 287 58.5
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 1.4e-87 327.0 280 57.9
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.9e-87 326.6 296 56.8
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.9e-87 326.6 278 59.4
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 3.2e-87 325.9 280 57.5
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 3.2e-87 325.9 290 56.6
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 4.1e-87 325.5 280 56.4
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 5.4e-87 325.1 267 61.4
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 5.4e-87 325.1 279 55.9
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 7.1e-87 324.7 280 57.9
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 9.2e-87 324.3 284 58.5
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 1.6e-86 323.6 280 56.8
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 2.1e-86 323.2 281 58.4
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 3.5e-86 322.4 280 57.5
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 1.3e-85 320.5 279 55.6
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 1.7e-85 320.1 241 65.6
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 2.3e-85 319.7 248 62.9
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 1.5e-84 317.0 268 60.1
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 5.6e-84 315.1 279 57.0
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 7.3e-84 314.7 282 57.1
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 4.0e-82 308.9 255 58.0
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 2.6e-81 306.2 244 57.4
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 5.8e-81 305.1 275 55.6
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 7.1e-79 298.1 241 60.2
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 2.1e-78 296.6 241 60.2
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 2.5e-76 289.7 278 54.7
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 3.3e-76 289.3 282 53.5
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 1.2e-75 287.3 282 54.3
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 2.6e-73 279.6 311 51.1
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 9.9e-73 277.7 237 58.2
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 1.3e-72 277.3 277 50.9
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 2.7e-70 269.6 367 43.6
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 8.7e-69 264.6 273 50.5
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 4.3e-68 262.3 256 49.6
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 8.1e-67 258.1 280 48.6
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 4.2e-63 245.7 190 61.6
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 7.9e-62 241.5 262 46.6
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.5e-60 237.3 219 55.3
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 4.2e-55 219.2 282 45.4
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 1.6e-51 207.2 279 41.9
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 5.8e-49 198.7 290 42.8
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.1e-47 194.5 287 40.8
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.7e-46 189.9 168 57.1
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 4.3e-44 182.6 277 39.4
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 2.0e-41 173.7 325 37.2
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 3.2e-39 166.4 369 32.8
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.2e-25 121.3 100 55.0
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 4.5e-25 119.4 263 33.1
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.6e-22 109.8 63 69.8
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 3.9e-21 106.3 189 35.4
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 8.8e-21 105.1 134 42.5
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.1e-20 104.8 64 71.9
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 1.6e-14 84.3 85 52.9
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.9e-07 60.8 91 40.7
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 3.6e-06 56.6 49 57.1
CSS0014268 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 4.7e-06 56.2 104 38.5


User provided reference genes

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