Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0938 Cannabis sativa HOM05D006753 ORTHO05D008521 5.3e-66 254.2 129 100.0
Duzib132G0454 Durio zibethinus HOM05D006753 ORTHO05D008521 1.2e-38 163.3 121 72.7
Glyma.10G288900 Glycine max HOM05D006753 ORTHO05D008521 1.6e-38 162.9 120 70.0
Cfa018673 Carpinus fangiana HOM05D006753 ORTHO05D008521 3.6e-38 161.8 127 67.7
MELO3C011766.2 Cucumis melo HOM05D006753 ORTHO05D008521 4.7e-38 161.4 120 70.8
FAN17G2405 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.4e-37 159.8 128 69.5
Atru.chr11.42 Acer truncatum HOM05D006753 ORTHO05D008521 4.0e-37 158.3 120 73.3
QL01p000327 Quercus lobata HOM05D006753 ORTHO05D008521 4.0e-37 158.3 128 67.2
CsaV3_5G029140 Cucumis sativus L. HOM05D006753 ORTHO05D008521 5.2e-37 157.9 120 69.2
MD13G1001300 Malus domestica HOM05D006753 ORTHO05D008521 5.2e-37 157.9 121 72.7
Sed0019092 Sechium edule HOM05D006753 ORTHO05D008521 8.8e-37 157.1 126 68.3
FvH4_4g37311 Fragaria vesca HOM05D006753 ORTHO05D008521 1.2e-36 156.8 128 68.0
FAN07G1749 Fragaria x ananassa HOM05D006753 ORTHO05D008521 1.2e-36 156.8 128 68.8
Phvul.007G012200 Phaseolus vulgaris HOM05D006753 ORTHO05D008521 3.4e-36 155.2 120 67.5
Thecc.02G152400 Theobroma cacao HOM05D006753 ORTHO05D008521 3.4e-36 155.2 121 70.2
Lalb_Chr02g0144111 Lupinus albus HOM05D006753 ORTHO05D008521 7.5e-36 154.1 124 68.5
Manes.04G161100 Manihot esculenta HOM05D006753 ORTHO05D008521 9.8e-36 153.7 115 70.4
Duzib052G0750 Durio zibethinus HOM05D006753 ORTHO05D008521 1.3e-35 153.3 121 69.4
RcHm_v2.0_Chr4g0447151 Rosa chinensis HOM05D006753 ORTHO05D008521 1.7e-35 152.9 121 71.9
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 1.7e-35 152.9 122 68.0
Lj5g0026283 Lotus japonicus HOM05D006753 ORTHO05D008521 8.3e-35 150.6 115 67.8
Nn3g18540 Nelumbo nucifera HOM05D006753 ORTHO05D008521 1.8e-34 149.4 119 69.7
DCAR_023493 Daucus carota HOM05D006753 ORTHO05D008521 2.4e-34 149.1 122 70.5
Medtr1g115255 Medicago truncatula HOM05D006753 ORTHO05D008521 3.1e-34 148.7 114 69.3
PGR044G1510 Punica granatum HOM05D006753 ORTHO05D008521 2.0e-33 146.0 121 66.9
MSTRG.13663 Avicennia marina HOM05D006753 ORTHO05D008521 4.5e-33 144.8 114 64.9
COL.COLO4_33141 Corchorus olitorius HOM05D006753 ORTHO05D008521 5.9e-33 144.4 128 63.3
Potri.008G003100 Populus trichocarpa HOM05D006753 ORTHO05D008521 5.9e-33 144.4 133 62.4
Sopen03g009600 Solanum pennellii HOM05D006753 ORTHO05D008521 7.7e-33 144.1 124 62.1
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 1.0e-32 143.7 121 63.6
CiPaw.16G000900 Carya illinoinensis HOM05D006753 ORTHO05D008521 1.3e-32 143.3 121 66.9
Sabra08G0001000 Salix brachista HOM05D006753 ORTHO05D008521 1.3e-32 143.3 126 63.5
VMungo0720G0065 Vigna mungo HOM05D006753 ORTHO05D008521 1.3e-32 143.3 121 66.9
TAR629G2108 Trochodendron aralioides HOM05D006753 ORTHO05D008521 2.3e-32 142.5 119 65.5
Migut.E00593 Erythranthe guttata HOM05D006753 ORTHO05D008521 2.9e-32 142.1 123 63.4
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 3.8e-32 141.7 117 64.1
Sc21g0003760 Simmondsia chinensis HOM05D006753 ORTHO05D008521 3.8e-32 141.7 120 65.8
Migut.E00658 Erythranthe guttata HOM05D006753 ORTHO05D008521 1.1e-31 140.2 123 62.6
ClCG11G012760 Citrullus lanatus HOM05D006753 ORTHO05D008521 7.2e-31 137.5 128 60.9
Ciclev10017207m.g Citrus clementina HOM05D006753 ORTHO05D008521 1.6e-30 136.3 120 64.2
Thhalv10002245m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 3.6e-30 135.2 131 61.8
PGSC0003DMG400018762 Solanum tuberosum HOM05D006753 ORTHO05D008521 4.7e-30 134.8 124 58.9
SGA_v2.0_scaffold119G32769 Striga asiatica HOM05D006753 ORTHO05D008521 8.0e-30 134.0 130 57.7
CAN.G815.2 Capsicum annuum HOM05D006753 ORTHO05D008521 1.4e-29 133.3 128 59.4
Ca_11278_v3 Cicer arietinum L. HOM05D006753 ORTHO05D008521 2.3e-29 132.5 114 64.9
Nitab4.5_0000075g0200 Nicotiana tabacum HOM05D006753 ORTHO05D008521 4.0e-29 131.7 134 56.0
ECA238G1815 Erigeron canadensis HOM05D006753 ORTHO05D008521 6.8e-29 131.0 134 59.7
MBI03_g11899_MAGBIO Magnolia biondii HOM05D006753 ORTHO05D008521 8.8e-29 130.6 116 61.2
Psat6g234480 Pisum sativum HOM05D006753 ORTHO05D008521 2.0e-28 129.4 124 58.9
Dinv25482 Davidia involucrata HOM05D006753 ORTHO05D008521 3.4e-28 128.6 128 57.8
Os10g0491900 Oryza sativa ssp. japonica HOM05D006753 ORTHO05D008521 3.4e-28 128.6 115 60.9
EL10Ac9g23017 Beta vulgaris HOM05D006753 ORTHO05D008521 4.4e-28 128.3 115 60.0
Rhsim05G0152000 Rhododendron simsii HOM05D006753 ORTHO05D008521 4.4e-28 128.3 106 64.2
Gohir.D12G135600 Gossypium hirsutum HOM05D006753 ORTHO05D008521 5.7e-28 127.9 119 60.5
ATR0124G001 Amborella trichopoda HOM05D006753 ORTHO05D008521 7.5e-28 127.5 118 62.7
FAN11G3971 Fragaria x ananassa HOM05D006753 ORTHO05D008521 3.7e-27 125.2 118 61.9
RcHm_v2.0_Chr5g0030611 Rosa chinensis HOM05D006753 ORTHO05D008521 1.1e-26 123.6 120 59.2
Gohir.A12G132000 Gossypium hirsutum HOM05D006753 ORTHO05D008521 1.4e-26 123.2 118 59.3
Gorai.008G146800 Gossypium raimondii HOM05D006753 ORTHO05D008521 1.4e-26 123.2 119 58.8
Prupe.1G351400 Prunus persica HOM05D006753 ORTHO05D008521 1.4e-26 123.2 121 60.3
FvH4_3g18161 Fragaria vesca HOM05D006753 ORTHO05D008521 1.8e-26 122.9 118 61.0
Carub.0005s1869 Capsella rubella HOM05D006753 ORTHO05D008521 2.4e-26 122.5 121 60.3
Nitab4.5_0008337g0010 Nicotiana tabacum HOM05D006753 ORTHO05D008521 4.1e-26 121.7 125 56.8
Lj6g0020021 Lotus japonicus HOM05D006753 ORTHO05D008521 5.4e-26 121.3 119 57.1
AUR62032899 Chenopodium quinoa HOM05D006753 ORTHO05D008521 9.2e-26 120.6 118 55.1
AT3G52350 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 1.2e-25 120.2 121 60.3
Nitab4.5_0001307g0130 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.2e-25 120.2 125 56.8
TPR.G4104 Trifolium pratense HOM05D006753 ORTHO05D008521 1.6e-25 119.8 121 57.9
Lsat_1_v5_gn_2_64221 Lactuca sativa HOM05D006753 ORTHO05D008521 2.7e-25 119.0 124 59.7
CDE05G2438 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 4.5e-25 118.2 118 56.8
Sp6g34360 Schrenkiella parvula HOM05D006753 ORTHO05D008521 7.8e-25 117.5 121 58.7
CDE05G0871 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 1.0e-24 117.1 117 56.4
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 1.0e-24 117.1 115 55.7
Aqoxy3G04333 Aquilegia oxysepala HOM05D006753 ORTHO05D008521 1.3e-24 116.7 107 59.8
CARHR204450 Cardamine hirsuta HOM05D006753 ORTHO05D008521 1.7e-24 116.3 122 59.0
Peaxi162Scf00003g02334 Petunia axillaris HOM05D006753 ORTHO05D008521 2.3e-24 115.9 105 58.1
AUR62017753 Chenopodium quinoa HOM05D006753 ORTHO05D008521 6.6e-24 114.4 117 54.7
BcaC07g41240 Brassica carinata HOM05D006753 ORTHO05D008521 2.5e-23 112.5 130 53.1
C08p42460 Brassica napus HOM05D006753 ORTHO05D008521 2.5e-23 112.5 130 53.1
BolC8t51807H Brassica oleracea HOM05D006753 ORTHO05D008521 2.5e-23 112.5 130 53.1
BraA09t41301Z Brassica rapa HOM05D006753 ORTHO05D008521 2.5e-23 112.5 116 57.8
Eucgr.J00331 Eucalyptus grandis HOM05D006753 ORTHO05D008521 7.3e-23 110.9 177 44.1
AUR62020818 Chenopodium quinoa HOM05D006753 ORTHO05D008521 9.5e-23 110.5 118 52.5
A09p59170 Brassica napus HOM05D006753 ORTHO05D008521 2.8e-22 109.0 131 53.4
SEGI_09956 Sequoiadendron giganteum HOM05D006753 ORTHO05D008521 6.1e-22 107.8 122 50.0
C09p68400 Brassica napus HOM05D006753 ORTHO05D008521 8.0e-22 107.5 126 54.0
BcaB08g34880 Brassica carinata HOM05D006753 ORTHO05D008521 1.4e-21 106.7 130 52.3
arahy.Tifrunner.gnm1.ann1.IW7U68 Arachis hypogaea HOM05D006753 ORTHO05D008521 5.2e-21 104.8 74 68.9
arahy.Tifrunner.gnm1.ann1.RGG8YR Arachis hypogaea HOM05D006753 ORTHO05D008521 5.2e-21 104.8 74 68.9
AL5G33000 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 6.8e-21 104.4 122 51.6
AL6G19240 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 1.5e-20 103.2 111 56.8
A10p28190 Brassica napus HOM05D006753 ORTHO05D008521 1.5e-20 103.2 123 52.8
BraA10t44868Z Brassica rapa HOM05D006753 ORTHO05D008521 1.5e-20 103.2 123 52.8
AT5G08535 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 5.7e-20 101.3 111 54.1
BolC9t59587H Brassica oleracea HOM05D006753 ORTHO05D008521 1.3e-19 100.1 123 52.8
PSO782G2482 Papaver somniferum HOM05D006753 ORTHO05D008521 2.2e-19 99.4 124 46.0
PSO063G2822 Papaver somniferum HOM05D006753 ORTHO05D008521 1.8e-18 96.3 124 45.2
Pp3c15_7650 Physcomitrium patens HOM05D006753 ORTHO05D008521 4.1e-18 95.1 121 47.1
Cc11_g04160 Coffea canephora HOM05D006753 ORTHO05D008521 2.0e-17 92.8 63 77.8
HanXRQChr14g0446421 Helianthus annuus HOM05D006753 ORTHO05D008521 4.6e-17 91.7 82 59.8
Aa31LG3G18000 Aethionema arabicum HOM05D006753 ORTHO05D008521 5.9e-17 91.3 115 52.2
Mapoly0001s0293 Marchantia polymorpha HOM05D006753 ORTHO05D008521 2.3e-16 89.4 118 46.6
Thhalv10015604m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 1.1e-15 87.0 88 62.5
Carub.0006s0749 Capsella rubella HOM05D006753 ORTHO05D008521 1.5e-15 86.7 122 50.0
SMO166G0033 Selaginella moellendorffii HOM05D006753 ORTHO05D008521 2.8e-14 82.4 109 46.8
BcaB08g37248 Brassica carinata HOM05D006753 ORTHO05D008521 8.0e-14 80.9 111 49.5
Nitab4.5_0002355g0040 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.1e-13 80.5 125 44.8
SHI21226 Sapria himalayana HOM05D000843 ORTHO05D000698 3.1e-13 79.0 109 45.9
SMO115G0110 Selaginella moellendorffii HOM05D000422 ORTHO05D002369 3.1e-13 79.0 107 45.8
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 6.8e-13 77.8 124 41.1
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 6.8e-13 77.8 124 41.1
Haze_17401 Corylus avellana HOM05D006753 ORTHO05D008521 1.4e-10 70.1 57 61.4
COL.COLO4_21663 Corchorus olitorius HOM05D006753 ORTHO05D008521 1.3e-08 63.5 86 48.8
vmacro19681 Vaccinium macrocarpon HOM05D006753 ORTHO05D008521 3.0e-08 62.4 38 76.3
Cre02.g085200 Chlamydomonas reinhardtii HOM05D006753 ORTHO05D008521 3.3e-07 58.9 50 50.0
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 3.3e-07 58.9 70 45.7
MCO15G305 Micromonas commoda HOM05D006753 ORTHO05D008521 7.3e-07 57.8 60 45.0
AagrBONN_evm.TU.Sc2ySwM_228.1188 Anthoceros agrestis HOM05D006753 ORTHO05D008521 1.2e-06 57.0 126 33.3
CSS0023466 Camellia sinensis var. sinensis HOM05D006753 ORTHO05D008521 1.2e-06 57.0 27 92.6
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.2e-06 57.0 65 41.5
HPP92_022791 Vanilla planifolia HOM05D004785 ORTHO05D005704 3.6e-06 55.5 60 46.7
CBR_g19876 Chara braunii HOM05D004785 ORTHO05D005704 4.7e-06 55.1 58 50.0
PGR042G2720 Punica granatum HOM05D005384 ORTHO05D006477 6.2e-06 54.7 67 43.3


User provided reference genes

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