Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 7.6e-96 354.0 200 100.0
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 2.3e-44 183.0 204 61.8
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 4.4e-43 178.7 210 60.5
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 5.7e-43 178.3 206 57.8
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 4.9e-42 175.3 193 57.5
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 4.9e-42 175.3 200 58.5
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 8.3e-42 174.5 212 50.9
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 5.4e-41 171.8 200 58.5
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 5.4e-41 171.8 211 52.1
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 5.4e-41 171.8 204 59.3
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.0e-40 169.9 211 51.7
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 2.7e-40 169.5 211 51.7
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 2.7e-40 169.5 205 59.0
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 4.5e-40 168.7 201 58.2
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 2.3e-39 166.4 200 55.0
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.2e-37 160.6 203 54.2
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 6.1e-37 158.3 206 56.8
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 6.1e-37 158.3 206 56.8
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.4e-36 157.1 206 56.3
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.2e-35 154.1 208 55.3
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 4.4e-35 152.1 208 51.4
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 4.4e-35 152.1 209 56.5
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 7.5e-35 151.4 212 48.6
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 3.7e-34 149.1 195 51.8
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 6.4e-34 148.3 197 56.3
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 6.4e-34 148.3 206 48.5
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 8.3e-34 147.9 205 47.3
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.1e-33 147.5 200 55.0
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 1.4e-33 147.1 200 57.5
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 2.4e-33 146.4 197 55.8
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 4.1e-33 145.6 200 50.0
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 7.0e-33 144.8 206 47.6
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.2e-32 144.1 213 45.5
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.5e-32 142.5 202 54.5
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 4.6e-32 142.1 203 49.8
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 1.7e-31 140.2 210 50.0
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 1.7e-31 140.2 207 44.9
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 2.3e-31 139.8 202 50.0
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 5.0e-31 138.7 196 44.9
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 6.6e-31 138.3 207 46.4
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 2.5e-30 136.3 206 48.5
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 2.5e-30 136.3 201 49.3
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 4.3e-30 135.6 206 42.7
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 4.3e-30 135.6 179 49.7
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 7.3e-30 134.8 210 49.0
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 7.3e-30 134.8 217 43.3
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 1.2e-29 134.0 202 48.0
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 2.8e-29 132.9 200 49.5
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 4.0e-28 129.0 214 46.3
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 8.9e-28 127.9 204 51.0
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.2e-27 127.5 204 51.0
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.5e-27 127.1 148 52.7
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 2.0e-27 126.7 201 44.3
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 2.0e-27 126.7 165 53.3
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 3.4e-27 125.9 199 48.2
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 4.4e-27 125.6 207 49.3
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.4e-27 125.6 209 47.4
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 1.7e-26 123.6 216 41.7
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 3.7e-26 122.5 195 47.2
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 1.4e-25 120.6 181 50.3
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 5.4e-25 118.6 197 47.2
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 7.0e-25 118.2 204 43.1
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 9.2e-25 117.9 207 42.5
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 1.2e-24 117.5 208 43.8
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 2.7e-24 116.3 176 44.3
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 6.0e-24 115.2 211 46.0
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 6.0e-24 115.2 211 46.0
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 7.8e-24 114.8 212 43.4
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.0e-23 114.4 162 51.9
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 6.6e-23 111.7 158 53.2
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 4.3e-22 109.0 222 41.0
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 4.3e-22 109.0 159 49.7
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 5.6e-22 108.6 73 71.2
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 7.3e-22 108.2 150 53.3
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 1.2e-21 107.5 220 40.5
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.2e-21 107.5 153 49.0
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 1.2e-21 107.5 213 43.2
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.1e-20 104.4 185 45.4
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 1.4e-20 104.0 213 44.1
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.4e-20 104.0 204 47.5
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 2.3e-20 103.2 208 44.2
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 2.3e-20 103.2 208 44.2
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 3.1e-20 102.8 155 48.4
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.0e-20 102.4 195 40.0
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 7.5e-19 98.2 144 50.7
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 1.3e-18 97.4 161 52.2
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.4e-17 94.0 189 42.3
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 1.9e-17 93.6 200 38.5
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 5.4e-17 92.0 209 42.1
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 1.2e-16 90.9 144 50.7
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 1.6e-16 90.5 189 38.6
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 3.5e-16 89.4 179 46.4
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 1.7e-15 87.0 135 53.3
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.0e-15 86.3 115 54.8
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 1.9e-14 83.6 128 53.1
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 4.3e-14 82.4 200 36.5
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 4.3e-14 82.4 63 68.3
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 5.6e-14 82.0 205 42.4
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 7.3e-14 81.6 149 40.3
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 2.1e-13 80.1 160 48.1
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 3.6e-13 79.3 124 52.4
CDE02G4694 Ceratophyllum demersum HOM05D007152 ORTHO05D008912 2.6e-11 73.2 158 44.3
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.6e-11 73.2 201 35.8
ATR0693G346 Amborella trichopoda HOM05D007152 ORTHO05D008912 1.7e-10 70.5 202 34.2
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 6.4e-10 68.6 50 66.0
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 1.9e-06 57.0 42 61.9
AagrBONN_evm.TU.Sc2ySwM_117.77 Anthoceros agrestis HOM05D037445 ORTHO05D031142 3.3e-06 56.2 146 35.6
Sed0010921 Sechium edule HOM05D007152 ORTHO05D008912 3.3e-06 56.2 188 31.4


User provided reference genes

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