Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 7.5e-26 119.8 62 100.0
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 8.9e-19 96.3 62 79.0
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 7.5e-18 93.2 57 84.2
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 8.3e-17 89.7 58 81.0
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 1.1e-16 89.4 63 73.0
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 1.4e-16 89.0 62 71.0
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 4.1e-16 87.4 63 73.0
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 4.1e-16 87.4 61 75.4
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-15 85.9 62 72.6
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 6.0e-15 83.6 61 75.4
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 7.8e-15 83.2 63 69.8
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 7.8e-15 83.2 63 69.8
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 1.0e-14 82.8 63 69.8
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.0e-14 82.8 63 69.8
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 1.3e-14 82.4 63 68.3
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.3e-14 82.4 63 66.7
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 1.7e-14 82.0 59 72.9
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.7e-14 82.0 63 65.1
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.7e-14 82.0 63 65.1
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.3e-14 81.6 63 68.3
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.3e-14 81.6 63 68.3
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.3e-14 81.6 61 73.8
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 2.3e-14 81.6 61 73.8
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 3.0e-14 81.3 63 65.1
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 3.0e-14 81.3 63 66.7
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 6.6e-14 80.1 65 63.1
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 8.6e-14 79.7 65 66.2
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 1.5e-13 79.0 63 65.1
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 1.9e-13 78.6 63 63.5
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 2.5e-13 78.2 63 63.5
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 3.3e-13 77.8 59 67.8
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 3.3e-13 77.8 64 62.5
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 4.3e-13 77.4 64 62.5
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 5.6e-13 77.0 58 63.8
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 7.3e-13 76.6 63 61.9
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 9.5e-13 76.3 63 60.3
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 9.5e-13 76.3 63 63.5
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 9.5e-13 76.3 63 61.9
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 9.5e-13 76.3 63 63.5
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 1.6e-12 75.5 63 60.3
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 1.6e-12 75.5 63 60.3
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 1.6e-12 75.5 63 60.3
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 1.6e-12 75.5 63 60.3
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 1.6e-12 75.5 63 60.3
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.6e-12 75.5 64 68.8
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 2.1e-12 75.1 63 58.7
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 3.6e-12 74.3 59 64.4
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 3.6e-12 74.3 59 61.0
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 4.7e-12 73.9 67 58.2
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 6.2e-12 73.6 63 63.5
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 6.2e-12 73.6 60 63.3
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 8.1e-12 73.2 63 58.7
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 8.1e-12 73.2 62 62.9
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.1e-11 72.8 61 65.6
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 4.0e-11 70.9 63 63.5
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.0e-11 70.9 63 58.7
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 4.0e-11 70.9 63 58.7
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 4.0e-11 70.9 65 58.5
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 5.2e-11 70.5 67 59.7
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 5.2e-11 70.5 61 60.7
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 8.9e-11 69.7 59 64.4
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-10 69.3 63 63.5
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-10 69.3 63 63.5
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-10 69.3 63 63.5
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 1.5e-10 68.9 63 65.1
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 1.5e-10 68.9 63 63.5
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.0e-10 68.6 65 60.0
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 3.4e-10 67.8 58 63.8
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 3.4e-10 67.8 65 53.8
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 4.4e-10 67.4 64 56.2
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.4e-10 67.4 63 63.5
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 4.4e-10 67.4 60 58.3
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.5e-10 66.6 63 61.9
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 2.9e-09 64.7 60 60.0
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.7e-09 64.3 47 74.5
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 3.7e-09 64.3 58 65.5
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.7e-09 64.3 63 61.9
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.4e-09 63.5 63 60.3
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 8.3e-09 63.2 63 60.3
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.1e-08 62.8 62 61.3
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.1e-08 62.8 62 61.3
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.1e-08 62.8 63 61.9
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-08 62.8 66 56.1
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-08 62.8 66 56.1
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-08 62.8 66 56.1
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.1e-08 62.8 66 56.1
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.4e-08 62.4 63 61.9
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.4e-08 62.4 65 55.4
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.4e-08 62.4 65 55.4
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.9e-08 62.0 63 60.3
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.9e-08 62.0 54 64.8
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.4e-08 61.6 63 55.6
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.2e-08 61.2 63 60.3
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 4.1e-08 60.8 61 57.4
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 5.4e-08 60.5 63 58.7
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 7.1e-08 60.1 66 53.0
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 7.1e-08 60.1 63 58.7
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 7.1e-08 60.1 71 47.9
A02p27890 Brassica napus HOM05D016819 ORTHO05D017546 1.2e-07 59.3 54 64.8
BraA02t07827Z Brassica rapa HOM05D016819 ORTHO05D017546 1.2e-07 59.3 54 64.8
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.2e-07 59.3 63 57.1
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 1.6e-07 58.9 59 57.6
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 2.1e-07 58.5 77 42.9
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.1e-07 58.5 63 57.1
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 2.1e-07 58.5 64 54.7
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 2.7e-07 58.2 54 55.6
BolC2t10448H Brassica oleracea HOM05D016819 ORTHO05D017546 4.6e-07 57.4 50 64.0
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.6e-07 57.4 63 57.1
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.6e-07 57.4 63 57.1
Pp3c5_19670 Physcomitrium patens HOM05D006167 ORTHO05D007635 4.6e-07 57.4 51 62.7
Migut.M01352 Erythranthe guttata HOM05D006167 ORTHO05D007635 6.0e-07 57.0 67 55.2
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 6.0e-07 57.0 63 57.1
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 7.8e-07 56.6 69 47.8
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 7.8e-07 56.6 69 47.8
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.0e-06 56.2 63 52.4
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.3e-06 55.8 63 54.0
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.7e-06 55.5 61 54.1
BcaC03g16585 Brassica carinata HOM05D016819 ORTHO05D017546 3.9e-06 54.3 48 60.4
C02p44020 Brassica napus HOM05D016819 ORTHO05D017546 3.9e-06 54.3 48 60.4
Aa31LG8G10950 Aethionema arabicum HOM05D006167 ORTHO05D007635 6.6e-06 53.5 64 53.1
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 6.6e-06 53.5 66 48.5


User provided reference genes

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