Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 9.6e-95 350.1 175 100.0
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 1.3e-51 206.8 161 62.7
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 3.0e-48 195.7 158 58.9
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 2.0e-47 193.0 158 57.6
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 5.4e-37 158.3 154 52.6
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 7.0e-29 131.3 114 60.5
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 6.0e-28 128.3 114 59.6
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 6.0e-28 128.3 103 61.2
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 7.8e-28 127.9 101 62.4
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 4.0e-24 115.5 103 54.4
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.0e-15 86.7 100 41.0
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 5.8e-15 85.1 100 40.0
AUR62042045 Chenopodium quinoa HOM05D012386 ORTHO05D002688 2.9e-14 82.8 104 41.3
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.4e-13 80.5 105 40.0
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 1.9e-13 80.1 108 39.8
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 1.9e-13 80.1 170 31.8
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 4.1e-13 79.0 111 39.6
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 7.1e-13 78.2 97 39.2
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.1e-13 78.2 97 42.3
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 7.1e-13 78.2 97 42.3
Thecc.04G224300 Theobroma cacao HOM05D012386 ORTHO05D002688 9.2e-13 77.8 98 44.9
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 2.7e-12 76.3 107 35.5
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.6e-11 71.6 128 32.8
AUR62044079 Chenopodium quinoa HOM05D012386 ORTHO05D002688 8.6e-11 71.2 105 38.1
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 1.1e-10 70.9 173 30.1
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 3.3e-10 69.3 83 38.6
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.6e-10 67.8 80 42.5
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-09 67.0 70 45.7
Sabra05G0195900 Salix brachista HOM05D012386 ORTHO05D002688 1.6e-09 67.0 72 48.6
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 2.1e-09 66.6 116 34.5
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-09 66.2 77 42.9
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 6.2e-09 65.1 111 32.4
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 8.1e-09 64.7 94 40.4
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 1.8e-08 63.5 101 34.7
TWI09G1336 Tripterygium wilfordii HOM05D012386 ORTHO05D002688 1.8e-08 63.5 107 40.2
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 1.5e-07 60.5 84 36.9
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 7.6e-07 58.2 84 36.9
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 9.9e-07 57.8 107 33.6
CSS0049663 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.3e-06 57.4 104 32.7
CSS0015173 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.7e-06 57.0 104 32.7
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 2.2e-06 56.6 84 35.7
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 2.2e-06 56.6 106 32.1
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 3.8e-06 55.8 81 34.6
Nitab4.5_0005788g0020 Nicotiana tabacum HOM05D008574 ORTHO05D010611 3.8e-06 55.8 122 31.1
Gorai.009G186900 Gossypium raimondii HOM05D005504 ORTHO05D002688 4.9e-06 55.5 42 66.7
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 6.4e-06 55.1 102 31.4


User provided reference genes

Program Settings