Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0818 Cannabis sativa HOM05D008880 ORTHO05D011235 1.2e-80 303.1 157 100.0
CANSAT80G2087 Cannabis sativa HOM05D008880 ORTHO05D011235 2.3e-55 219.2 152 75.7
CANSAT21G0969 Cannabis sativa HOM05D008880 ORTHO05D011235 6.7e-55 217.6 140 80.7
CANSAT21G0142 Cannabis sativa HOM05D008880 ORTHO05D011235 1.6e-48 196.4 123 79.7
CANSAT11G0103 Cannabis sativa HOM05D008880 ORTHO05D011235 1.3e-42 176.8 123 72.4
CANSAT54G2124 Cannabis sativa HOM05D008880 ORTHO05D011235 3.1e-36 155.6 108 73.1
CANSAT64G2559 Cannabis sativa HOM05D008880 ORTHO05D011235 3.1e-28 129.0 74 86.5
CANSAT11G0442 Cannabis sativa HOM05D008880 ORTHO05D011235 4.2e-25 118.6 71 83.1
CANSAT11G0473 Cannabis sativa HOM05D008880 ORTHO05D011235 1.4e-23 113.6 88 65.9
CANSAT35G0612 Cannabis sativa HOM05D008880 ORTHO05D011235 2.0e-22 109.8 150 45.3
CANSAT64G2389 Cannabis sativa HOM05D008880 ORTHO05D011235 4.5e-19 98.6 63 76.2
CANSAT21G0194 Cannabis sativa HOM05D004810 ORTHO05D006272 3.0e-15 85.9 50 86.0
CANSAT80G1402 Cannabis sativa HOM05D008880 ORTHO05D011235 6.3e-13 78.2 49 77.6
Sed0006359 Sechium edule HOM05D013798 ORTHO05D011235 7.0e-12 74.7 104 39.4
Atru.chr1.2215 Acer truncatum HOM05D000002 ORTHO05D000001 9.2e-12 74.3 118 33.1
CANSAT21G1096 Cannabis sativa HOM05D008880 ORTHO05D011235 1.1e-09 67.4 45 75.6
TWI39G0463 Tripterygium wilfordii HOM05D000002 ORTHO05D001544 1.1e-09 67.4 108 34.3
Atru.chr6.681 Acer truncatum HOM05D008880 ORTHO05D011235 2.5e-09 66.2 113 38.9
PSO541G2218 Papaver somniferum HOM05D000002 ORTHO05D001544 3.3e-09 65.9 105 33.3
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-09 65.9 120 32.5
Sopen07g019940 Solanum pennellii HOM05D008880 ORTHO05D001544 3.3e-09 65.9 165 30.3
TWI38G0876 Tripterygium wilfordii HOM05D008880 ORTHO05D001544 4.3e-09 65.5 108 33.3
Sopen05g028350 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-09 65.1 120 32.5
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 5.6e-09 65.1 167 28.7
SHI16484 Sapria himalayana HOM05D008880 ORTHO05D011235 7.3e-09 64.7 61 55.7
PGR031G3187 Punica granatum HOM05D008880 ORTHO05D001544 9.5e-09 64.3 117 37.6
TWI39G1064 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.2e-08 63.9 144 30.6
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 120 31.7
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 63.5 167 28.1
MELO3C031376.2 Cucumis melo HOM05D020348 ORTHO05D025205 2.1e-08 63.2 74 41.9
PGR031G0569 Punica granatum HOM05D000002 ORTHO05D001544 2.8e-08 62.8 109 33.9
CANSAT54G0321 Cannabis sativa HOM05D008880 ORTHO05D011235 4.7e-08 62.0 83 42.2
Sopen11g023840 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-08 62.0 165 29.1
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.1e-08 61.6 142 33.8
PSO017G3397 Papaver somniferum HOM05D000002 ORTHO05D001544 8.0e-08 61.2 105 34.3
CANSAT11G1275 Cannabis sativa HOM05D008880 ORTHO05D011235 1.0e-07 60.8 114 36.8
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-07 60.5 86 38.4
SGA_v2.0_scaffold43G16507 Striga asiatica HOM05D000002 ORTHO05D000001 1.8e-07 60.1 106 36.8
PGR031G0989 Punica granatum HOM05D000002 ORTHO05D001544 2.3e-07 59.7 109 33.0
MD00G1044200 Malus domestica HOM05D000002 ORTHO05D001544 5.2e-07 58.5 102 32.4
CANSAT21G0663 Cannabis sativa HOM05D008880 ORTHO05D011235 8.9e-07 57.8 118 32.2
CANSAT25G1266 Cannabis sativa HOM05D008880 ORTHO05D011235 2.6e-06 56.2 98 41.8


User provided reference genes

Program Settings