Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0808 Cannabis sativa HOM05D009472 ORTHO05D000137 1.0e-81 306.6 148 100.0
CANSAT54G2383 Cannabis sativa HOM05D009472 ORTHO05D000137 7.4e-64 247.3 166 74.1
CANSAT80G2627 Cannabis sativa HOM05D009472 ORTHO05D000137 3.7e-63 245.0 153 78.4
CANSAT54G2039 Cannabis sativa HOM05D009472 ORTHO05D000137 7.0e-62 240.7 161 74.5
CANSAT35G0617 Cannabis sativa HOM05D009472 ORTHO05D000137 2.6e-61 238.8 154 76.6
CANSAT80G1813 Cannabis sativa HOM05D009472 ORTHO05D000137 2.2e-60 235.7 153 76.5
CANSAT50G0005 Cannabis sativa HOM05D009472 ORTHO05D000137 8.5e-60 233.8 153 75.8
CANSAT21G0042 Cannabis sativa HOM05D009472 ORTHO05D000137 1.8e-57 226.1 109 95.4
CANSAT35G0678 Cannabis sativa HOM05D009472 ORTHO05D000137 3.3e-56 221.9 151 74.8
CANSAT21G0269 Cannabis sativa HOM05D009472 ORTHO05D000137 9.7e-56 220.3 101 100.0
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 1.3e-47 193.4 158 65.8
CANSAT11G1718 Cannabis sativa HOM05D009472 ORTHO05D000137 2.5e-35 152.5 106 65.1
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 1.4e-33 146.7 109 63.3
CANSAT21G1289 Cannabis sativa HOM05D009472 ORTHO05D000137 1.4e-25 120.2 93 61.3
CANSAT64G1982 Cannabis sativa HOM05D009472 ORTHO05D000137 5.2e-25 118.2 132 47.0
CANSAT54G2098 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-20 103.6 91 53.8
CANSAT54G2653 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-20 103.6 91 53.8
CANSAT56G0862 Cannabis sativa HOM05D000679 ORTHO05D000137 1.3e-20 103.6 91 53.8
CANSAT80G0147 Cannabis sativa HOM05D017160 ORTHO05D000137 1.5e-19 100.1 76 61.8
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 2.5e-19 99.4 76 61.8
CANSAT64G1718 Cannabis sativa HOM05D017160 ORTHO05D000137 2.5e-19 99.4 76 61.8
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.7e-15 86.7 78 55.1
CANSAT80G2520 Cannabis sativa HOM05D017160 ORTHO05D013047 1.6e-10 70.1 73 45.2
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 8.1e-10 67.8 62 48.4
Oeu047965.1 Olea europaea HOM05D002749 ORTHO05D000708 1.8e-09 66.6 94 39.4
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.8e-09 64.7 83 43.4
Oeu032773.1 Olea europaea HOM05D002749 ORTHO05D000708 1.5e-08 63.5 93 33.3
CANSAT25G1234 Cannabis sativa HOM05D023333 ORTHO05D000137 2.0e-08 63.2 58 50.0
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 2.0e-08 63.2 62 46.8
CANSAT54G1856 Cannabis sativa HOM05D009472 ORTHO05D000137 2.6e-08 62.8 51 56.9
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-08 62.8 83 39.8
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 2.6e-08 62.8 77 41.6
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 3.4e-08 62.4 61 47.5
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.4e-08 62.4 83 43.4
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.4e-08 62.0 83 42.2
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.4e-08 62.0 93 37.6
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 5.8e-08 61.6 67 46.3
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 5.8e-08 61.6 62 50.0
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.6e-08 61.2 91 38.5
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-08 60.8 62 45.2
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-08 60.8 62 46.8
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-07 60.5 141 29.8
Solyc09g150106.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 1.7e-07 60.1 76 36.8
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 1.7e-07 60.1 82 40.2
CANSAT54G0513 Cannabis sativa HOM05D008636 ORTHO05D000137 2.2e-07 59.7 105 37.1
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 2.2e-07 59.7 76 36.8
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 3.8e-07 58.9 77 40.3
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.9e-07 58.5 67 46.3
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.4e-07 58.2 59 49.2
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 6.4e-07 58.2 76 34.2
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 6.4e-07 58.2 61 49.2
SGA_v2.0_scaffold23G10125 Striga asiatica HOM05D000679 ORTHO05D000137 6.4e-07 58.2 90 37.8
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-06 57.4 64 46.9
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 1.1e-06 57.4 76 34.2
Sopen06g017270 Solanum pennellii HOM05D009268 ORTHO05D011733 1.1e-06 57.4 76 34.2
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 1.1e-06 57.4 76 34.2
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-06 57.0 60 46.7
CANSAT54G1484 Cannabis sativa HOM05D000679 ORTHO05D000137 1.9e-06 56.6 91 31.9
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-06 56.6 83 41.0
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-06 56.6 131 32.8
SGA_v2.0_scaffold2G00971 Striga asiatica HOM05D000679 ORTHO05D000137 1.9e-06 56.6 88 40.9
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-06 55.8 59 45.8
Oeu002342.1 Olea europaea HOM05D002749 ORTHO05D000708 3.2e-06 55.8 84 34.5
Oeu060593.1 Olea europaea HOM05D002749 ORTHO05D000708 3.2e-06 55.8 76 39.5
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 3.2e-06 55.8 76 34.2
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-06 55.5 83 39.8
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.4e-06 55.1 83 39.8
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 9.2e-06 54.3 84 40.5
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 9.2e-06 54.3 91 34.1
SGA_v2.0_scaffold276G46661 Striga asiatica HOM05D000679 ORTHO05D000137 9.2e-06 54.3 115 33.9


User provided reference genes

Program Settings